RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 KRT78Q8N1N4 520 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 RNF175Q8N4F7 328 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 AFAP1L2Q8N4X5 818 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 CSNK1A1LQ8N752 337 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 KCT2Q8NC54 265 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 CAMKVQ8NCB2 501 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 TTLQ8NG68 377 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 HUS1BQ8NHY5 278 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 MGARPQ8TDB4 240 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 PPP4R1Q8TF05 950 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 ZNF473Q8WTR7 871 aaKnown RBP6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 SLC13A3Q8WWT9 602 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 UBE2E3Q969T4 207 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 ATP6V1E2Q96A05 226 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 SEC16BQ96JE7 1060 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 C10orf90Q96M02 699 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 TEFMQ96QE5 360 aaKnown RBP6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 MACROD1Q9BQ69 325 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 ASPSCR1Q9BZE9 553 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 KLHL31Q9H511 634 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 AKIRIN1Q9H9L7 192 aaPredicted RBP6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 FANCEQ9HB96 536 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 NKIRAS1Q9NYS0 192 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 DKK4Q9UBT3 224 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 HAO1Q9UJM8 370 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 RUVBL1Q9Y265 456 aaKnown RBP6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 STK38LQ9Y2H1 464 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 FRYQ5TBA9 3013 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 FREM2Q5SZK8 3169 aa6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 MDC1Q14676 2089 aaKnown RBP6.72□□□□□ -1.33
CHCHD3P1-201ENST00000425516 SPTBP11277 2137 aa6.71□□□□□ -1.33
CHCHD3P1-201ENST00000425516 HYKKA2RU49 373 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 LRIT2A6NDA9 550 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ANKDD1BA6NHY2 528 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MAGEB17A8MXT2 336 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TXNDC9O14530 226 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KLF11O14901 512 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 DSCR3O14972 297 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FOXS1O43638 330 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SCRG1O75711 98 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 STK17BO94768 372 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KIAA0754O94854 1291 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 PDYNP01213 254 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 STATHP02808 62 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NTRK1P04629 796 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 EIF2S1P05198 315 aaKnown RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ENO1P06733 434 aaKnown RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CAPN1P07384 714 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 UROSP10746 265 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NR1D1P20393 614 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 BGNP21810 368 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 GRK2P25098 689 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HNRNPH1P31943 449 aaKnown RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NEK2P51955 445 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ARSFP54793 590 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ABCE1P61221 599 aaKnown RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 BST1Q10588 318 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 GPS2Q13227 327 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 STX3Q13277 289 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FAM53BQ14153 422 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 GRM7Q14831 915 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FAM214AQ32MH5 1076 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TBC1D25Q3MII6 688 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CFAP157Q5JU67 520 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 C10orf62Q5T681 223 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 DEPDC1Q5TB30 811 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 YOD1Q5VVQ6 348 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 GARNL3Q5VVW2 1013 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FRG2Q64ET8 278 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HIST2H2AA3Q6FI13 130 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TLDC1Q6P9B6 456 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 GPR135Q8IZ08 494 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 DTWD1Q8N5C7 304 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TBC1D19Q8N5T2 526 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZNF655Q8N720 491 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CDYL2Q8N8U2 506 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RAB3IL1Q8TBN0 382 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 METTL6Q8TCB7 284 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 UTP15Q8TED0 518 aaKnown RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZNF75CPQ92670 426 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 N4BP2L2Q92802 583 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RERGQ96A58 199 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NXPE2Q96DL1 559 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MS4A6EQ96DS6 147 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MAGEB10Q96LZ2 347 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZNF578Q96N58 590 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 LRFN5Q96NI6 719 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FRG2BQ96QU4 278 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KCNA7Q96RP8 456 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SORT1Q99523 831 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 PAIP2Q9BPZ3 127 aaKnown RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MS4A8Q9BY19 250 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SLC29A3Q9BZD2 475 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SHCBP1LQ9BZQ2 653 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ACTR5Q9H9F9 607 aaPredicted RBP6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MID1IP1Q9NPA3 183 aa6.71□□□□□ -1.34
CHCHD3P1-201ENST00000425516 DMRT3Q9NQL9 472 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms