RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FAM90A27PA6NNH2 459 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NRDCO43847 1150 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HAUS5O94927 633 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HOXD4P09016 255 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZNF888P0CJ79 500 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PTGER1P34995 402 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 COILP38432 576 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 VPS41P49754 854 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ST13P50502 369 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KRTAP10-9P60411 292 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PPIAP62937 165 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PMPCAQ10713 525 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TERF2Q15554 542 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRIP13Q15645 432 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NDUFAF5Q5TEU4 345 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GK5Q6ZS86 529 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KIAA0408Q6ZU52 694 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DENND6AQ8IWF6 608 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DMRTC2Q8IXT2 367 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TMEM132CQ8N3T6 1108 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZFP62Q8NB50 900 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZNF740Q8NDX6 193 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MCUQ8NE86 351 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ABHD11Q8NFV4 315 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TTLQ8NG68 377 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GOT1L1Q8NHS2 421 aaPredicted RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NT5CQ8TCD5 201 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CD200R1Q8TD46 325 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ASB15Q8WXK1 588 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SLC30A3Q99726 388 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NPAS2Q99743 824 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SGPP1Q9BX95 441 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DEFB127Q9H1M4 99 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LDAHQ9H6V9 325 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 EXO5Q9H790 373 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PNO1Q9NRX1 252 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CLCA3PQ9Y6N3 262 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SVILO95425 2214 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CRYBG3Q68DQ2 2970 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRBV11-1A0A0K0K1C0 115 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR14I1A6ND48 311 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DYRK3O43781 588 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MAN1A2O60476 641 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ITGA10O75578 1167 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 WISP2O76076 250 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TTC4O95801 387 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ENO2P09104 434 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TNNI3P19429 210 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SAT1P21673 171 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HNF4AP41235 474 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SLC1A2P43004 574 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZFP36L2P47974 494 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TGM3Q08188 693 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SLC13A2Q13183 592 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GXYLT1Q4G148 440 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HSP90AA5PQ58FG0 334 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 WLSQ5T9L3 541 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NCCRP1Q6ZVX7 275 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PDSS2Q86YH6 399 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KIF2BQ8N4N8 673 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRIM58Q8NG06 486 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR4K1Q8NGD4 311 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR5T3Q8NGG3 340 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR5L2Q8NGL0 311 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GRK7Q8WTQ7 553 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SLC5A11Q8WWX8 675 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DAZLQ92904 295 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NINJ1Q92982 152 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NAT9Q9BTE0 207 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NPLQ9BXD5 320 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CAPS2Q9BXY5 557 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SYNPO2LQ9H987 977 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 IARS2Q9NSE4 1012 aaKnown RBP11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZFATQ9P243 1243 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TNFRSF10DQ9UBN6 386 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ACAD8Q9UKU7 415 aa11.46□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NBPF19A0A087WUL8 3843 aa11.46□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TCRBV16S1A1N1A0A5B0 115 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NPIPA2E9PIF3 369 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NPIPA3F8WFD2 350 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ADAM10O14672 748 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MYO1DO94832 1006 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 IFNA16P05015 189 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SERPINA6P08185 405 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CNR1P21554 472 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DNASE1P24855 282 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MAGEA6P43360 314 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 EFNA3P52797 238 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HSD17B7P56937 341 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RAB8AP61006 207 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OLR1P78380 273 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 BTN3A2P78410 334 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 BTG2P78543 158 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TBL3Q12788 808 aaKnown RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SF3B4Q15427 424 aaKnown RBP eCLIP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CDSNQ15517 529 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ZNF468Q5VIY5 522 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FBXW10Q5XX13 1052 aa11.45□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ZNF585AQ6P3V2 769 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms