RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 QRFPRQ96P65 431 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 TWSG1Q9GZX9 223 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 AASDHPPTQ9NRN7 309 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 SNX7Q9UNH6 387 aa25.3■■□□□ 1.64
LDB1-202ENST00000425280 ARHGAP10A1A4S6 786 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 ZNF26P17031 533 aaPredicted RBP25.29■■□□□ 1.64
LDB1-202ENST00000425280 GAB1Q13480 694 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 NUDT13Q86X67 352 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 TRIM48Q8IWZ4 208 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 GALNT4Q8N4A0 578 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 OR52E4Q8NGH9 312 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 BTBD9Q96Q07 612 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 NELL2Q99435 816 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 COQ10BQ9H8M1 238 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 TPT1P8Q9HAU6 139 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 CNOT11Q9UKZ1 510 aaKnown RBP25.29■■□□□ 1.64
LDB1-202ENST00000425280 VPS4AQ9UN37 437 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 AP1M2Q9Y6Q5 423 aa25.29■■□□□ 1.64
LDB1-202ENST00000425280 FAM149AA5PLN7 773 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 GPR37L1O60883 481 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 STATHP02808 62 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 FCGR1AP12314 374 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 UQCRBP14927 111 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 GPR18Q14330 331 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 PLCL1Q15111 1095 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 ADHFE1Q8IWW8 467 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 DEFB119Q8N690 84 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 GOT1L1Q8NHS2 421 aaPredicted RBP25.28■■□□□ 1.64
LDB1-202ENST00000425280 FLVCR1-AS1Q8TAF5 88 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 FAM162AQ96A26 154 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 KLHL31Q9H511 634 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 ADAM29Q9UKF5 820 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 WBP11Q9Y2W2 641 aaKnown RBP25.28■■□□□ 1.64
LDB1-202ENST00000425280 GMEB1Q9Y692 573 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 AK5Q9Y6K8 562 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 CREG1O75629 220 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 C6orf47O95873 294 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 GSTM2P28161 218 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 AHRP35869 848 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 HBA1P69905 142 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 KLC1Q07866 573 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 HYAL2Q12891 473 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 TBC1D19Q8N5T2 526 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 PNPT1Q8TCS8 783 aaKnown RBP25.28■■□□□ 1.64
LDB1-202ENST00000425280 ZFP90Q8TF47 636 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 RNF145Q96MT1 663 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 CIB1Q99828 191 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 MACROD1Q9BQ69 325 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 DDX31Q9H8H2 851 aaKnown RBP25.28■■□□□ 1.64
LDB1-202ENST00000425280 SYNPO2LQ9H987 977 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 MIEF1Q9NQG6 463 aa25.28■■□□□ 1.64
LDB1-202ENST00000425280 PPM1DO15297 605 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 TMPRSS11DO60235 418 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 NDUFS2O75306 463 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 ABCB1P08183 1280 aaPredicted RBP25.27■■□□□ 1.64
LDB1-202ENST00000425280 PLA2G16P53816 162 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 ZP2Q05996 745 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 KIR2DS3Q14952 304 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 TMEM35AQ53FP2 167 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 OR4C11Q6IEV9 310 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 PAQR7Q86WK9 346 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 SFTPA2Q8IWL1 248 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 CLEC4FQ8N1N0 589 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 NETO1Q8TDF5 533 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 NCLNQ969V3 563 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 SLC22A18Q96BI1 424 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 TEFMQ96QE5 360 aaKnown RBP25.27■■□□□ 1.64
LDB1-202ENST00000425280 CHID1Q9BWS9 393 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 SLC6A16Q9GZN6 736 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 ZNF282Q9UDV7 671 aaPredicted RBP25.27■■□□□ 1.64
LDB1-202ENST00000425280 PCDHGA4Q9Y5G9 962 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 AXIN1O15169 862 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 KCNK5O95279 499 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 VIPP01282 170 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 DDCP20711 480 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 ZCCHC8Q6NZY4 707 aaKnown RBP25.27■■□□□ 1.64
LDB1-202ENST00000425280 TAF8Q7Z7C8 310 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 FAM86B1Q8N7N1 296 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 AMER3Q8N944 861 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 MFSD9Q8NBP5 474 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 FBXO30Q8TB52 745 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 FAM174AQ8TBP5 190 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 ZFPM2Q8WW38 1151 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 VCXQ9H320 206 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 CPNE7Q9UBL6 633 aa25.27■■□□□ 1.64
LDB1-202ENST00000425280 A0A0G2JN53 185 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 METTL12A8MUP2 240 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 MT-ND1P03886 318 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 RETP07949 1114 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 UBE2IP63279 158 aaKnown RBP25.26■■□□□ 1.63
LDB1-202ENST00000425280 ADPRMQ3LIE5 342 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 CPZQ66K79 652 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 IRGCQ6NXR0 463 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 ENPP6Q6UWR7 440 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 PARGQ86W56 976 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 ZZZ3Q8IYH5 903 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 FAM47BQ8NA70 645 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 CENPNQ96H22 339 aaPredicted RBP25.26■■□□□ 1.63
LDB1-202ENST00000425280 OR2A14Q96R47 310 aa25.26■■□□□ 1.63
LDB1-202ENST00000425280 C17orf62Q9BQA9 187 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms