RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 SPSB2Q99619 263 aa20.54■□□□□ 0.88
SEC22C-207ENST00000423701 GATA5Q9BWX5 397 aaPredicted RBP20.54■□□□□ 0.88
SEC22C-207ENST00000423701 WDR54Q9H977 334 aa20.54■□□□□ 0.88
SEC22C-207ENST00000423701 TRPC4Q9UBN4 977 aa20.54■□□□□ 0.88
SEC22C-207ENST00000423701 ZNF282Q9UDV7 671 aaPredicted RBP20.54■□□□□ 0.88
SEC22C-207ENST00000423701 MAP4K5Q9Y4K4 846 aa20.54■□□□□ 0.88
SEC22C-207ENST00000423701 IGLV3-12A0A075B6K2 115 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 UQCRHLA0A096LP55 91 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 UBFD1O14562 309 aaKnown RBP20.53■□□□□ 0.88
SEC22C-207ENST00000423701 TGFB1P01137 390 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 UQCRHP07919 91 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 CD63P08962 238 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 HPDP32754 393 aaPredicted RBP20.53■□□□□ 0.88
SEC22C-207ENST00000423701 CCR10P46092 362 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 NEK2P51955 445 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 MAGOHP61326 146 aaKnown RBP20.53■□□□□ 0.88
SEC22C-207ENST00000423701 IL10RAQ13651 578 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 MPP2Q14168 576 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 FRG2Q64ET8 278 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 SHISA5Q8N114 240 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 OR2L5Q8NG80 312 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 OR2Y1Q8NGV0 311 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 AGAP11Q8TF27 550 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 SNRNP27Q8WVK2 155 aaKnown RBP20.53■□□□□ 0.88
SEC22C-207ENST00000423701 FRG2BQ96QU4 278 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 F2RL3Q96RI0 385 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 KCNK9Q9NPC2 374 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 HCN3Q9P1Z3 774 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 PTRH2Q9Y3E5 179 aaKnown RBP20.53■□□□□ 0.88
SEC22C-207ENST00000423701 PKD1L2Q7Z442 2459 aa20.53■□□□□ 0.88
SEC22C-207ENST00000423701 DSPP15924 2871 aaKnown RBP20.53■□□□□ 0.88
SEC22C-207ENST00000423701 A0A0G2JN53 185 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 VSTM2BA6NLU5 285 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 MAGEB17A8MXT2 336 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 NKX2-8O15522 239 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 SH3BGRLO75368 114 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 ZWINTO95229 277 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 BPGMP07738 259 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 PRKAR1AP10644 381 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 PLA2G16P53816 162 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 PKNOX1P55347 436 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 RPS13P62277 151 aaKnown RBP20.52■□□□□ 0.88
SEC22C-207ENST00000423701 SKP1P63208 163 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 PHEXP78562 749 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 ASPHQ12797 758 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 COL28A1Q2UY09 1125 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 TTC19Q6DKK2 380 aaPredicted RBP20.52■□□□□ 0.88
SEC22C-207ENST00000423701 NIPAL1Q6NVV3 410 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 TRIM40Q6P9F5 258 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 CDYL2Q8N8U2 506 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 OR5T3Q8NGG3 340 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 STT3BQ8TCJ2 826 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 ARL8AQ96BM9 186 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 CMTM7Q96FZ5 175 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 YIPF2Q9BWQ6 316 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 OR51B5Q9H339 312 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 MKKSQ9NPJ1 570 aaPredicted RBP20.52■□□□□ 0.88
SEC22C-207ENST00000423701 NXT1Q9UKK6 140 aaKnown RBP20.52■□□□□ 0.88
SEC22C-207ENST00000423701 EPG5Q9HCE0 2579 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 SCN3AQ9NY46 2000 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 LOC400499M0QZD8 3231 aa20.52■□□□□ 0.88
SEC22C-207ENST00000423701 ESRRBO95718 433 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 FOLR3P41439 243 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 SERPINB4P48594 390 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 OLR1P78380 273 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 BTN3A2P78410 334 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 MC1RQ01726 317 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 OCA2Q04671 838 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 CDC20Q12834 499 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 IFT88Q13099 833 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 ERV3-1Q14264 604 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 CRTC2Q53ET0 693 aaPredicted RBP20.51■□□□□ 0.87
SEC22C-207ENST00000423701 VWA2Q5GFL6 755 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 ATP1A1-AS1Q5TC04 95 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 AGBL2Q5U5Z8 902 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 KHDRBS2Q5VWX1 349 aaKnown RBP20.51■□□□□ 0.87
SEC22C-207ENST00000423701 ABHD17CQ6PCB6 329 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 SHISA6Q6ZSJ9 500 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 MIEF2Q96C03 454 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 MTFMTQ96DP5 389 aaKnown RBP20.51■□□□□ 0.87
SEC22C-207ENST00000423701 PKNOX2Q96KN3 472 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 ELOVL6Q9H5J4 265 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 PRORYQ9H606 182 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 SOX17Q9H6I2 414 aaPredicted RBP20.51■□□□□ 0.87
SEC22C-207ENST00000423701 MID1IP1Q9NPA3 183 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 PTPRQQ9UMZ3 2332 aa20.51■□□□□ 0.87
SEC22C-207ENST00000423701 FOXE1O00358 373 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-207ENST00000423701 DNAJB6O75190 326 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 SASH3O75995 380 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 RECKO95980 971 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 ENO1P06733 434 aaKnown RBP20.5■□□□□ 0.87
SEC22C-207ENST00000423701 UMODP07911 640 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 FURINP09958 794 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 ZGLP1P0C6A0 271 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 DHRS4L1P0CG22 281 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 TMEM35AQ53FP2 167 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 TCHHL1Q5QJ38 904 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-207ENST00000423701 C10orf62Q5T681 223 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-207ENST00000423701 ZCCHC23Q6ZST2 131 aa20.5■□□□□ 0.87
SEC22C-207ENST00000423701 CHSY3Q70JA7 882 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms