RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PLCXD2Q0VAA5 305 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 FOXO1Q12778 655 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 FOXD4Q12950 439 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 SEC23AQ15436 765 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 C1QL3Q5VWW1 255 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 NAA35Q5VZE5 725 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 FRMPD2BQ6IN97 320 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 SLC8B1Q6J4K2 584 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 DRICH1Q6PGQ1 229 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 AFTPHQ6ULP2 937 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM108Q6UXF1 575 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 C3orf62Q6ZUJ4 267 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 MRPL10Q7Z7H8 261 aaKnown RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 DEFB106AQ8N104 65 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 THAP3Q8WTV1 239 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 FAM222BQ8WU58 562 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TP53INP1Q96A56 240 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 EFHD2Q96C19 240 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TCEAL4Q96EI5 215 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 NSMCE3Q96MG7 304 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CYP2S1Q96SQ9 504 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CACNG6Q9BXT2 260 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 RACGAP1Q9H0H5 632 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 GOLGA2P5Q9HBQ8 144 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 MYOZ1Q9NP98 299 aaPredicted RBP3.4□□□□□ -1.86
TOP2A-201ENST00000423485 SNX15Q9NRS6 342 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 GID8Q9NWU2 228 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 TUBGCP4Q9UGJ1 667 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 CD84Q9UIB8 345 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 IKZF3Q9UKT9 509 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 SCML2Q9UQR0 700 aa3.4□□□□□ -1.86
TOP2A-201ENST00000423485 A0A0J9YY10 115 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PVALEFA0A1B0GWK0 134 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 A0A1W2PQ09 198 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ILVBLA1L0T0 632 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TLCD2A6NGC4 264 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 H3BQF6 201 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 XPNPEP2O43895 674 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PLA2G2AP14555 144 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PPP3CBP16298 524 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 HOXB9P17482 250 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 NR1D1P20393 614 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 NOS3P29474 1203 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 LILRA4P59901 499 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 MYL6P60660 151 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 EIF4EBP2Q13542 120 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PDK2Q15119 407 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ETFDHQ16134 617 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 GRAMD1BQ3KR37 738 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SGO1Q5FBB7 561 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FAM219BQ5XKK7 198 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TCTN3Q6NUS6 607 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ZC3HC1Q86WB0 502 aaKnown RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF276Q8N554 614 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 KIAA1958Q8N8K9 716 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 DCAF4L2Q8NA75 395 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 IL17RCQ8NAC3 791 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SMYD1Q8NB12 490 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TRPV3Q8NET8 790 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 NFKBIDQ8NI38 313 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 LNX1Q8TBB1 728 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SLC25A28Q96A46 364 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 NACC2Q96BF6 587 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 USP28Q96RU2 1077 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FIZ1Q96SL8 496 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FICDQ9BVA6 458 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 UNKQ9C0B0 810 aaKnown RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 WDR12Q9GZL7 423 aaKnown RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 DNAJC18Q9H819 358 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ASB6Q9NWX5 421 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 OR12D3Q9UGF7 316 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PCYOX1Q9UHG3 505 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 CYTH4Q9UIA0 394 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 UTP11Q9Y3A2 253 aaKnown RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 RALGAPA2Q2PPJ7 1873 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 UNC79Q9P2D8 2635 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 IGHV1OR15-9A0A0B4J2B8 117 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TRBV11-1A0A0K0K1C0 115 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SLC5A10A0PJK1 596 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 GSC2O15499 205 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PI15O43692 258 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FAM107AO95990 144 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TMIGD3P0DMS9 266 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 HGFP14210 728 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 PRPS1L1P21108 318 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 LPOP22079 712 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 IL10P22301 178 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 UQCRC2P22695 453 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 TTPAP49638 278 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 CCNHP51946 323 aaPredicted RBP3.4□□□□□ -1.87
TOP2A-201ENST00000423485 SPARCL1Q14515 664 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 COBLL1Q53SF7 1204 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 C6orf141Q5SZD1 244 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 LRIF1Q5T3J3 769 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FBXW8Q8N3Y1 598 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 OR5L1Q8NGL2 311 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 OR1J4Q8NGS1 313 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 HM13Q8TCT9 377 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF566Q969W8 418 aa3.4□□□□□ -1.87
TOP2A-201ENST00000423485 FBXO17Q96EF6 278 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms