RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CCDC71Q8IV32 467 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 AMER3Q8N944 861 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 C11orf65Q8NCR3 313 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 OR5D16Q8NGK9 328 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 HDAC2Q92769 488 aaKnown RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 COL26A1Q96A83 441 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 CHCHD6Q9BRQ6 235 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 CPEB1Q9BZB8 566 aaKnown RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF639Q9UID6 485 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 RPS6KA6Q9UK32 745 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 A0A1W2PRB8 838 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 C5orf58C9J3I9 102 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 SLC31A1O15431 190 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 OR1F1O43749 312 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 LATS1O95835 1130 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 GZMMP51124 257 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 TAP2Q03519 686 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 ILF2Q12905 390 aaKnown RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 NPRL3Q12980 569 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 GBX1Q14549 363 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 MED22Q15528 200 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 ADPRMQ3LIE5 342 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 LGI4Q8N135 537 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 TRAM1L1Q8N609 369 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 UBTD2Q8WUN7 234 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 TFGQ92734 400 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 HTRA1Q92743 480 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 RNF31Q96EP0 1072 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 SLC6A16Q9GZN6 736 aa12.8□□□□□ -0.36
MCF2L-213ENST00000421756 ZBTB20Q9HC78 741 aaPredicted RBP12.8□□□□□ -0.36
MCF2L-213ENST00000421756 KRBA1A5PL33 1030 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 AGAP14A8MT82 685 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 HEPACAM2A8MVW5 462 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 PSMA3P25788 255 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 TIA1P31483 386 aaKnown RBP eCLIP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 IDUAP35475 653 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CTSKP43235 329 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 RFX3P48380 749 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 DUSP7Q16829 419 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 TRIM16LQ309B1 348 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 SLCO4C1Q6ZQN7 724 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 ADGRD2Q7Z7M1 963 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CENPSQ8N2Z9 138 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 TCAIMQ8N3R3 496 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 GOLM1Q8NBJ4 401 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 LEMD2Q8NC56 503 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 OR10G2Q8NGC3 310 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 FNDC8Q8TC99 324 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CCDC115Q96NT0 180 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 COPS4Q9BT78 406 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 QRSL1Q9H0R6 528 aaKnown RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 DNAAF2Q9NVR5 837 aaKnown RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 DUSP12Q9UNI6 340 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 RGS10O43665 173 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 SLCO2B1O94956 709 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CRYBA2P53672 197 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 LRIF1Q5T3J3 769 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 PSRC1Q6PGN9 363 aaPredicted RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF547Q8IVP9 402 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 STX19Q8N4C7 294 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 SUSD6Q92537 303 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 APOL4Q9BPW4 351 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 GPATCH2Q9NW75 528 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 FRS3O43559 492 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 PRAMEF10O60809 474 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CYP7B1O75881 506 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CKMT1AP12532 417 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 TNNI3P19429 210 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 MMP12P39900 470 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 NRIP1P48552 1158 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 LIPJQ5W064 366 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 TMIGD1Q6UXZ0 262 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CEACAM20Q6UY09 585 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 CALHM3Q86XJ0 350 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 FAR1Q8WVX9 515 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 ATL1Q8WXF7 558 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 FCRL4Q96PJ5 515 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 C17orf62Q9BQA9 187 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 EXO1Q9UQ84 846 aaKnown RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 RBMX2Q9Y388 322 aaKnown RBP12.79□□□□□ -0.36
MCF2L-213ENST00000421756 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
MCF2L-213ENST00000421756 NTN1O95631 604 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 FPR1P21462 350 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 HOXA9P31269 272 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF234Q14588 700 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CLCA4Q14CN2 919 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 SHQ1Q6PI26 577 aaKnown RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 P2RY8Q86VZ1 359 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
MCF2L-213ENST00000421756 TESCQ96BS2 214 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 LMCD1Q9NZU5 365 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 ZNF229Q9UJW7 825 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 CA5BQ9Y2D0 317 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 TPRKBQ9Y3C4 175 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 INSL6Q9Y581 213 aa12.78□□□□□ -0.36
MCF2L-213ENST00000421756 GBF1Q92538 1859 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms