RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SUPT3HO75486 399 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 CLEC3AO75596 197 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 IL10P22301 178 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 CXCR2P25025 360 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 GSTM2P28161 218 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 SERPINB9P50453 376 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 CHIT1Q13231 466 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 RUNX2Q13950 521 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 XKR6Q5GH73 641 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 Q6ZS92 163 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 TRMT10CQ7L0Y3 403 aaKnown RBP19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 ABHD13Q7L211 337 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 UBE3DQ7Z6J8 389 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 GSPT2Q8IYD1 628 aaKnown RBP19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 CA13Q8N1Q1 262 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 SNX31Q8N9S9 440 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 TTLQ8NG68 377 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 TSLPQ969D9 159 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 EFCAB11Q9BUY7 163 aa19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 CLK4Q9HAZ1 481 aaKnown RBP19.42■□□□□ 0.7
PKNOX1-202ENST00000418336 IGKV3D-11A0A0A0MRZ8 115 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 TRIM49D1C9J1S8 452 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 CLGNO14967 610 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 ZIC2O95409 532 aaPredicted RBP19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 SERPINA7P05543 415 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 FHP07954 510 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 INHBAP08476 426 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 PCBP2Q15366 365 aaKnown RBP eCLIP19.41■□□□□ 0.75e-6■■■□□ 16.3
PKNOX1-202ENST00000418336 MINDY4Q4G0A6 757 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 ADGRD1Q6QNK2 874 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 CPEB2Q7Z5Q1 589 aaKnown RBP19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 KBTBD2Q8IY47 623 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 LAS2Q8IYD9 372 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 KRT78Q8N1N4 520 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 MZB1Q8WU39 189 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 GAL3ST3Q96A11 431 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 TBC1D20Q96BZ9 403 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 VPS11Q9H270 941 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 LUZP4Q9P127 313 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 SCN2AQ99250 2005 aa19.41■□□□□ 0.7
PKNOX1-202ENST00000418336 MAGEB17A8MXT2 336 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 FAM227AF5H4B4 570 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 POC1B-GALNT4F8VUJ3 575 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 E2F3O00716 465 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 H2AFYO75367 372 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 CDC123O75794 336 aaPredicted RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 ITGAMP11215 1152 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 CNTFP26441 200 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 MSH2P43246 934 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 ALDH18A1P54886 795 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 AGAP7PQ5VUJ5 663 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 NIPAL1Q6NVV3 410 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 ABHD17CQ6PCB6 329 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 TIFABQ6ZNK6 161 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 CUZD1Q86UP6 607 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 EIF1ADQ8N9N8 165 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 BRIX1Q8TDN6 353 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 ZNF473Q8WTR7 871 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 VPS50Q96JG6 964 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 AGAP4Q96P64 663 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 TUBB6Q9BUF5 446 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 RIC8BQ9NVN3 520 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 G3BP2Q9UN86 482 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 B3GNT3Q9Y2A9 372 aa19.4■□□□□ 0.7
PKNOX1-202ENST00000418336 CNTRLQ7Z7A1 2325 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 CLEC18AA5D8T8 446 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 SYCE1LA8MT33 242 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 KLHL41O60662 606 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 SEC24DO94855 1032 aaPredicted RBP19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 SIX3O95343 332 aaPredicted RBP19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 S100BP04271 92 aaPredicted RBP19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 ALPPP05187 535 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 BTN3A2P78410 334 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 BTG2P78543 158 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 PFKFB4Q16877 469 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 GRHL2Q6ISB3 625 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 CLEC18BQ6UXF7 455 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 QSOX2Q6ZRP7 698 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 CLEC18CQ8NCF0 446 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 TMEM52Q8NDY8 209 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 OR2L5Q8NG80 312 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 PPP4R1Q8TF05 950 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 BARD1Q99728 777 aaKnown RBP19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 MS4A8Q9BY19 250 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 PRDM7Q9NQW5 492 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 OPTCQ9UBM4 332 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 TSC22D4Q9Y3Q8 395 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 PCDHGA10Q9Y5H3 936 aa19.39■□□□□ 0.69
PKNOX1-202ENST00000418336 A0A0G2JN53 185 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 URADA6NGE7 173 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 TGFBR3LH3BV60 316 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 ERI3O43414 337 aaKnown RBP19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 COL6A2P12110 1019 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 TNFRSF8P28908 595 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 HNRNPFP52597 415 aaKnown RBP19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 STXBP1P61764 594 aaKnown RBP19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 IRF8Q02556 426 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 SRSF1Q07955 248 aaKnown RBP eCLIP19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 MFAP5Q13361 173 aa19.38■□□□□ 0.69
PKNOX1-202ENST00000418336 LAPTM5Q13571 262 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms