RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TEX26Q8N6G2 289 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 RBPMSQ93062 196 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 ZSWIM3Q96MP5 696 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 OSMRQ99650 979 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CLN6Q9NWW5 311 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 TXNL4BQ9NX01 149 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PPT2Q9UMR5 302 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 A8MVJ9 347 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 C19orf81C9J6K1 198 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 WWP2O00308 870 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 SOCS7O14512 581 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 AP2A2O94973 939 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 ALDH1A1P00352 501 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CLEC2LP0C7M8 214 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 ENGP17813 658 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 HK1P19367 917 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PTX3P26022 381 aaPredicted RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CCT3P49368 545 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 MADCAM1Q13477 382 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 NFE2L1Q14494 772 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 TMEM107Q6UX40 140 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 LIPIQ6XZB0 460 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 GPR155Q7Z3F1 870 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 OR4C15Q8NGM1 316 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 TMEM43Q9BTV4 400 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CRISPLD1Q9H336 500 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 MYOZ2Q9NPC6 264 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 B3GAT2Q9NPZ5 323 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 NLE1Q9NVX2 485 aaPredicted RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PHF11Q9UIL8 331 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 DLGAP4Q9Y2H0 992 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 LOC102723532A0A0G2JNH3 316 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 WASH4PA8MWX3 477 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 PEX10O60683 326 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 HAPLN1P10915 354 aaPredicted RBP7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 CKMT1AP12532 417 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 CLCN7P51798 805 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 BTG1P62324 171 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 BTN1A1Q13410 526 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 FGFBP1Q14512 234 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 PTGES3Q15185 160 aaKnown RBP7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 KLHL22Q53GT1 634 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 AFTPHQ6ULP2 937 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 UMODL1-AS1Q8N2C9 162 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 OR52H1Q8NGJ2 320 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 ST8SIA4Q92187 359 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 AP3S1Q92572 193 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 DACT3Q96B18 629 aaPredicted RBP7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 PHF21AQ96BD5 680 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 HMCESQ96FZ2 354 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 HHIPQ96QV1 700 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 DPH2Q9BQC3 489 aaPredicted RBP7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 UQCC2Q9BRT2 126 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 WASH6PQ9NQA3 447 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 NDUFAF4Q9P032 175 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 KLK14Q9P0G3 267 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 UBQLN2Q9UHD9 624 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 CLEC2DQ9UHP7 191 aa7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 DNMT3AQ9Y6K1 912 aaPredicted RBP7.71□□□□□ -1.17
HMGXB4-202ENST00000418170 MYBPHLA2RUH7 354 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SUV39H1O43463 412 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 HBQ1P09105 142 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 ZP3P21754 424 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF140P52738 457 aaPredicted RBP7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 ABRQ12979 859 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 FCN2Q15485 313 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 MICAQ29983 383 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SGO1Q5FBB7 561 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 CTSL3PQ5NE16 218 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 BICRALQ6AI39 1079 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 METAP1DQ6UB28 335 aaPredicted RBP7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SBSNQ6UWP8 590 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 MSANTD1Q6ZTZ1 278 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 TLK2Q86UE8 772 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 RBFAQ8N0V3 343 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 LGI4Q8N135 537 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 OR9Q1Q8NGQ5 310 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 MTERF3Q96E29 417 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 MED18Q9BUE0 208 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 NT5DC2Q9H857 520 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SLC25A19Q9HC21 320 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 ZNF304Q9HCX3 659 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 EMC7Q9NPA0 242 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 SGK494L7N484 410 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 GJB3O75712 270 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 PRAMEF1O95521 474 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 EPOP01588 193 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 KCNE1P15382 129 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 HMGB2P26583 209 aaKnown RBP7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 HSPA7P48741 367 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 PPP3R1P63098 170 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 RIPPLY1Q0D2K3 151 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 MLLT11Q13015 90 aaPredicted RBP7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 CDH18Q13634 790 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 CNIH2Q6PI25 160 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 PTCHD4Q6ZW05 846 aa7.71□□□□□ -1.18
HMGXB4-202ENST00000418170 LRRC17Q8N6Y2 441 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms