RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ILF2Q12905 390 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRAF2Q12933 501 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 PDGFRLQ15198 375 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TAF1AQ15573 450 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 AAK1Q2M2I8 961 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FUT11Q495W5 492 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FASTKD1Q53R41 847 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARL13AQ5H913 290 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TCEAL5Q5H9L2 206 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 GKAP1Q5VSY0 366 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM45BPQ6NSW5 357 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ANKRD54Q6NXT1 300 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 NCEH1Q6PIU2 408 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 MTSS1LQ765P7 747 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC91Q7Z6B0 441 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 PTAR1Q7Z6K3 402 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 SDCCAG8Q86SQ7 713 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMEM25Q86YD3 366 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 LMNTD2Q8IXW0 634 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 CACNA2D3Q8IZS8 1091 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 DCLK2Q8N568 766 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR2C3Q8N628 320 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 SMRP1Q8NCR6 262 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR2AP1Q8NGE2 309 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR6K2Q8NGY2 324 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 B4GALNT2Q8NHY0 566 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM45AQ8TCE6 357 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 BRSK1Q8TDC3 778 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TCP10LQ8TDR4 215 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF473Q8WTR7 871 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 UCMAQ8WVF2 138 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FGF13Q92913 245 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 PEX13Q92968 403 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 MUL1Q969V5 352 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TADA1Q96BN2 335 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ALG14Q96F25 216 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 REXO5Q96IC2 774 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ELMO2Q96JJ3 720 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 SERAC1Q96JX3 654 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 DNAJC1Q96KC8 554 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 MAGEB18Q96M61 343 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ADAD1Q96M93 576 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM111AQ96PZ2 611 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC2A11Q9BYW1 496 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 GPR63Q9BZJ6 419 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 MFSD1Q9H3U5 465 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 RHOJQ9H4E5 214 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC134Q9H6E4 229 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARNT2Q9HBZ2 717 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZFP14Q9HCL3 533 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FBXO6Q9NRD1 293 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 TREX1Q9NSU2 369 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC2A6Q9UGQ3 507 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 FBXO5Q9UKT4 447 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 CDH7Q9ULB5 785 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 SLC39A10Q9ULF5 831 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 RPL26L1Q9UNX3 145 aaKnown RBP3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ERVW-1Q9UQF0 538 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 HS3ST2Q9Y278 367 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF711Q9Y462 761 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR51B4Q9Y5P0 310 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 PSAT1Q9Y617 370 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARL5AQ9Y689 179 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 PLXNB3Q9ULL4 1909 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 CENPFP49454 3210 aa3.71□□□□□ -1.82
HMGB3P20-201ENST00000417997 COL4A2P08572 1712 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3DA0A087WVF3 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3IA0A087WXS9 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3EA0A087X179 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3KA0A087X1G2 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 A0A096LPK6 155 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 C1orf232A0A0U1RR37 186 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CXorf51AA0A1B0GTR3 108 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GXYLT2A0PJZ3 443 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCDC162PA2VCL2 907 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3BA6NDS4 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3FA6NER0 549 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 OR51F1A6NGY5 319 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBC1D3LB9A6J9 549 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 E5RI56 91 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 K7ERQ8 282 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 EBAG9O00559 213 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CCL22O00626 93 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 LINC01565O15544 149 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 DHHO43323 396 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 LDB2O43679 373 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 BUD23O43709 281 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TYROBPO43914 113 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 TBX10O75333 385 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 NDUFS3O75489 264 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 KIAA0754O94854 1291 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 PGLSO95336 258 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 CD160O95971 181 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 FAM107AO95990 144 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 GOT2P00505 430 aaKnown RBP3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 C1QAP02745 245 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 APODP05090 189 aa3.7□□□□□ -1.82
HMGB3P20-201ENST00000417997 UGT2B4P06133 528 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms