RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 STT3BQ8TCJ2 826 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 ADAMTS17Q8TE56 1095 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 TRPC4APQ8TEL6 797 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 MIEF2Q96C03 454 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 MS4A6EQ96DS6 147 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 FAM111AQ96PZ2 611 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 RBCK1Q9BYM8 510 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
SKA1-203ENST00000417656 DMRT3Q9NQL9 472 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 SENP1Q9P0U3 644 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 MID2Q9UJV3 735 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 NXT1Q9UKK6 140 aaKnown RBP11.82□□□□□ -0.52
SKA1-203ENST00000417656 PLLPQ9Y342 182 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 MAP4K5Q9Y4K4 846 aa11.82□□□□□ -0.52
SKA1-203ENST00000417656 IGLV3-12A0A075B6K2 115 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 LRIT2A6NDA9 550 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 URADA6NGE7 173 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 H0YIV9 168 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 TYROBPO43914 113 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 JRKO75564 520 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 CD63P08962 238 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 ZGLP1P0C6A0 271 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 IMPDH1P20839 514 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 SERPINB1P30740 379 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 PLA2G16P53816 162 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 SKP1P63208 163 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 KLC1Q07866 573 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 ATP1A4Q13733 1029 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 CASP8Q14790 479 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 DEFB109BQ30KR1 87 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 ADPRMQ3LIE5 342 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 GGTA1PQ4G0N0 100 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 PPP1R32Q7Z5V6 425 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 MRGPREQ86SM8 312 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 CROCCP2Q86T23 111 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 RAB43Q86YS6 212 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 C10orf107Q8IVU9 208 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 OR2L5Q8NG80 312 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 HUS1BQ8NHY5 278 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 TCP10LQ8TDR4 215 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 REPS1Q96D71 796 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 CCDC126Q96EE4 140 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 F2RL3Q96RI0 385 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 ZNF382Q96SR6 550 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 MTERF1Q99551 399 aaKnown RBP11.81□□□□□ -0.52
SKA1-203ENST00000417656 CRB3Q9BUF7 120 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 NTMT1Q9BV86 223 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 REXO4Q9GZR2 422 aaKnown RBP11.81□□□□□ -0.52
SKA1-203ENST00000417656 GSTO2Q9H4Y5 243 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 C14orf105Q9NVL8 296 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 POLHQ9Y253 713 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 MAN2B2Q9Y2E5 1009 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 PCDHGA11Q9Y5H2 935 aa11.81□□□□□ -0.52
SKA1-203ENST00000417656 SAP18O00422 153 aaKnown RBP11.8□□□□□ -0.52
SKA1-203ENST00000417656 DNAJB6O75190 326 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 OR4F21O95013 312 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 RECKO95980 971 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TGFB1P01137 390 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 H2AFXP16104 143 aaPredicted RBP11.8□□□□□ -0.52
SKA1-203ENST00000417656 CERS1P27544 350 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 CCR10P46092 362 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 XCR1P46094 333 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 NEK2P51955 445 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 RPS13P62277 151 aaKnown RBP11.8□□□□□ -0.52
SKA1-203ENST00000417656 BTN3A2P78410 334 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 PHEXP78562 749 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 LCP2Q13094 533 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TBR1Q16650 682 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TNFAIP8L3Q5GJ75 292 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 CPZQ66K79 652 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TRIM40Q6P9F5 258 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 FRMD7Q6ZUT3 714 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 GPRIN3Q6ZVF9 776 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 MILR1Q7Z6M3 343 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 EXOC3L1Q86VI1 746 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 OR51Q1Q8NH59 317 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 WDR20Q8TBZ3 569 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TTC9Q92623 222 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 EXTL1Q92935 676 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 PGM2Q96G03 612 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 PEX11GQ96HA9 241 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 FAR2Q96K12 515 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 CATSPER2Q96P56 530 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 QRFPRQ96P65 431 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 MECRQ9BV79 373 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 OR51B5Q9H339 312 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 COPS7BQ9H9Q2 264 aaPredicted RBP11.8□□□□□ -0.52
SKA1-203ENST00000417656 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
SKA1-203ENST00000417656 OXSMQ9NWU1 459 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TRPS1Q9UHF7 1281 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 ZNF225Q9UK10 706 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 TSC22D4Q9Y3Q8 395 aa11.8□□□□□ -0.52
SKA1-203ENST00000417656 LOC400499M0QZD8 3231 aa11.79□□□□□ -0.52
SKA1-203ENST00000417656 MGAQ8IWI9 3026 aa11.79□□□□□ -0.52
SKA1-203ENST00000417656 ARGFXA6NJG6 315 aa11.79□□□□□ -0.52
SKA1-203ENST00000417656 MAGEB17A8MXT2 336 aa11.79□□□□□ -0.52
SKA1-203ENST00000417656 RTCAO00442 366 aaKnown RBP11.79□□□□□ -0.52
SKA1-203ENST00000417656 CHST10O43529 356 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms