RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 VSX2P58304 361 aaPredicted RBP16.99■□□□□ 0.31
VCP-202ENST00000417448 C3AR1Q16581 482 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 TAOK1Q7L7X3 1001 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ADAMTS18Q8TE60 1221 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 CHTF18Q8WVB6 975 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ANKRD7Q92527 254 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 PSMF1Q92530 271 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ZUFSPQ96AP4 578 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 RHBDF1Q96CC6 855 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 SPOCK3Q9BQ16 436 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 TMEM79Q9BSE2 394 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ABI3Q9P2A4 366 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 TINAGQ9UJW2 476 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 PLCL2Q9UPR0 1127 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 SLC22A14Q9Y267 594 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ASB1Q9Y576 335 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 VPS13CQ709C8 3753 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 PRRC2AP48634 2157 aaKnown RBP16.98■□□□□ 0.31
VCP-202ENST00000417448 TLDC2A0PJX2 215 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 FEZF1A0PJY2 475 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 OR2A25A4D2G3 310 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 LRRC14BA6NHZ5 514 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 SLC19A2O60779 497 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 KLHL2O95198 593 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ONECUT2O95948 504 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ALBP02768 609 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 EIF2S1P05198 315 aaKnown RBP16.98■□□□□ 0.31
VCP-202ENST00000417448 HSPA7P48741 367 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 AGTR2P50052 363 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ART1P52961 327 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 RBBP7Q16576 425 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.98■□□□□ 0.316e-7■■■■□ 26.5
VCP-202ENST00000417448 CATSPEREQ5SY80 951 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 CAPN13Q6MZZ7 669 aaPredicted RBP16.98■□□□□ 0.31
VCP-202ENST00000417448 TTLL10Q6ZVT0 673 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 NCCRP1Q6ZVX7 275 aaPredicted RBP16.98■□□□□ 0.31
VCP-202ENST00000417448 THOC6Q86W42 341 aaKnown RBP16.98■□□□□ 0.31
VCP-202ENST00000417448 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.31
VCP-202ENST00000417448 SCYL1Q96KG9 808 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ATOH8Q96SQ7 321 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 MACROD1Q9BQ69 325 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 CCDC77Q9BR77 488 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 PLCD4Q9BRC7 762 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ENKD1Q9H0I2 346 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 SLC26A1Q9H2B4 701 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 ZNF160Q9HCG1 818 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 SEMA3GQ9NS98 782 aa16.98■□□□□ 0.31
VCP-202ENST00000417448 PSMC3IPQ9P2W1 217 aaPredicted RBP16.98■□□□□ 0.31
VCP-202ENST00000417448 A0A1B0GX78 115 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 TARM1B6A8C7 271 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 WDR47O94967 919 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 FAM83EQ2M2I3 478 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 ZNF425Q6IV72 752 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 LCTLQ6UWM7 567 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 C17orf64Q86WR6 236 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 STAG3L4Q8TBR4 150 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 BRIX1Q8TDN6 353 aaKnown RBP16.97■□□□□ 0.31
VCP-202ENST00000417448 ATL1Q8WXF7 558 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 ISL2Q96A47 359 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 SELENOSQ9BQE4 189 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 SPNS1Q9H2V7 528 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 WWOXQ9NZC7 414 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 PTGFRNQ9P2B2 879 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 RAB21Q9UL25 225 aa16.97■□□□□ 0.31
VCP-202ENST00000417448 DYTNA2CJ06 578 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 H0YGG7 62 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 LCMT2O60294 686 aaKnown RBP16.96■□□□□ 0.31
VCP-202ENST00000417448 CCNDBP1O95273 360 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 MED26O95402 600 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 HPP00738 406 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 PYGBP11216 843 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 CD99P14209 185 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 CNTFP26441 200 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 SMSP52788 366 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 ARF3P61204 181 aaPredicted RBP16.96■□□□□ 0.31
VCP-202ENST00000417448 SNRPNP63162 240 aaKnown RBP16.96■□□□□ 0.31
VCP-202ENST00000417448 CSNK1G2P78368 415 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 CDKL1Q00532 357 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 PMP22Q01453 160 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 WASHC2DQ5SRD0 308 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 FAAH2Q6GMR7 532 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 EMBQ6PCB8 327 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 METTL27Q8N6F8 245 aaPredicted RBP16.96■□□□□ 0.31
VCP-202ENST00000417448 ZNF740Q8NDX6 193 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 MZB1Q8WU39 189 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 HAS2Q92819 552 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 CAVIN3Q969G5 261 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 NEIL2Q969S2 332 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 C8orf44Q96CB5 159 aa16.96■□□□□ 0.31
VCP-202ENST00000417448 TREX2Q9BQ50 279 aaPredicted RBP16.96■□□□□ 0.31
VCP-202ENST00000417448 CPSF2Q9P2I0 782 aaKnown RBP16.96■□□□□ 0.31
VCP-202ENST00000417448 GTF3C1Q12789 2109 aa16.96■□□□□ 0.3
VCP-202ENST00000417448 IQANK1A0A1B0GTG1 560 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 VSTM2BA6NLU5 285 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 P2RX6O15547 441 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 CCNT2O60583 730 aaKnown RBP16.95■□□□□ 0.3
VCP-202ENST00000417448 KERAO60938 352 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 RASAL1O95294 804 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 FKBP9O95302 570 aa16.95■□□□□ 0.3
VCP-202ENST00000417448 S100BP04271 92 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms