RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ANKRD28O15084 1053 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 FABP7O15540 132 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 HRO43593 1189 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 EEDO75530 441 aaKnown RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 SCELO95171 688 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 OAZ2O95190 189 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 AP2A1O95782 977 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 GLP2RO95838 553 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 PLATP00750 562 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 FABP1P07148 127 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 HAPLN1P10915 354 aaPredicted RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 CTPS1P17812 591 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 BTF3P20290 206 aaKnown RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 PRKACGP22612 351 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 OR4D2P58180 307 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 ALDH6A1Q02252 535 aaKnown RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 SP140Q13342 867 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 EXOSC2Q13868 293 aaKnown RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 PCID2Q5JVF3 399 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 RTL4Q6ZR62 310 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 NPWQ8N729 165 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 KREMEN2Q8NCW0 462 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 GPR151Q8TDV0 419 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 ATOH1Q92858 354 aaPredicted RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 TCEAL3Q969E4 200 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 NXPE3Q969Y0 559 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 OTULINQ96BN8 352 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 PHF21BQ96EK2 531 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 RADILQ96JH8 1075 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 ERMAPQ96PL5 475 aaPredicted RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 SDR39U1Q9NRG7 319 aaPredicted RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 RASSF1Q9NS23 344 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
SIK3-203ENST00000415541 NCKAP1Q9Y2A7 1128 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 VPS9D1Q9Y2B5 631 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 RLFQ13129 1914 aa7.56□□□□□ -1.2
SIK3-203ENST00000415541 NCF1BA6NI72 391 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 NCF1CA8MVU1 366 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 SMLR1H3BR10 107 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SLC22A3O75751 556 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SNAPC5O75971 98 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ANXA3P12429 323 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 NCF1P14598 390 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 KIR2DL3P43628 341 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 KCNC1P48547 511 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 RGS6P49758 472 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 RAB13P51153 203 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ZNF81P51508 661 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 PYCR3Q53H96 274 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 CDKL4Q5MAI5 379 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ESRP1Q6NXG1 681 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 CHMP1BQ7LBR1 199 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SCD5Q86SK9 330 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 UBE2J2Q8N2K1 259 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ATG16L2Q8NAA4 619 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 KIAA1143Q96AT1 154 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 TSPAN17Q96FV3 270 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 KLHL15Q96M94 604 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ZNF285Q96NJ3 590 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 TMEM74Q96NL1 305 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 WDFY2Q96P53 400 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 NPAS1Q99742 590 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 RBFOX1Q9NWB1 397 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 SDHAF2Q9NX18 166 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 GPN3Q9UHW5 284 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 BTRCQ9Y297 605 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ZFC3H1O60293 1989 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 FAM95CA0A1B0GW59 222 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 PQLC2LA1A4F0 135 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 LRRC72A6NJI9 287 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 WRBO00258 174 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ABCD4O14678 606 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 MATN3O15232 486 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 B4GALT3O60512 393 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 CNPP09543 421 aaKnown RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 SBK3P0C264 359 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SLC35E2BP0CK96 405 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ATXN8OSP0DMR3 200 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ARSBP15848 533 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 GGT1P19440 569 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 RORAP35398 523 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 STARP49675 285 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 SEMG2Q02383 582 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ARHGEF7Q14155 803 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ATP6AP1LQ52LC2 224 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 CLEC6AQ6EIG7 209 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 PYHIN1Q6K0P9 492 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 GLT6D1Q7Z4J2 308 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 TMEM135Q86UB9 458 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 CYP4Z2PQ8N1L4 340 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 OR2T12Q8NG77 320 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 FCRL3Q96P31 734 aaPredicted RBP7.55□□□□□ -1.2
SIK3-203ENST00000415541 ASPNQ9BXN1 380 aa7.55□□□□□ -1.2
SIK3-203ENST00000415541 ADGRE3Q9BY15 652 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms