RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 SULT1C3Q6IMI6 304 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 H3F3CQ6NXT2 135 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 TMIGD1Q6UXZ0 262 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 SLCO4C1Q6ZQN7 724 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 CTAGE6Q86UF2 777 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 PPM1NQ8N819 430 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 CREB3L4Q8TEY5 395 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 CCT6BQ92526 530 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 FAR2Q96K12 515 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 RHBGQ9H310 441 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 KLHL31Q9H511 634 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 CD274Q9NZQ7 290 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 OSGIN2Q9Y236 505 aa23.49■■□□□ 1.35
HLA-C-204ENST00000415537 SPTBN1Q01082 2364 aaKnown RBP23.49■■□□□ 1.35
HLA-C-204ENST00000415537 A1L4Q6 167 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 PRAMEF2O60811 474 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 RASAL1O95294 804 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 LDLRP01130 860 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 S100BP04271 92 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-204ENST00000415537 SMIM10L1P0DMW3 83 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 GSTM2P28161 218 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 STX2P32856 288 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 MAGEA4P43358 317 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 TAS2R50P59544 299 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 SLBPQ14493 270 aaKnown RBP eCLIP23.48■■□□□ 1.35
HLA-C-204ENST00000415537 KBTBD12Q3ZCT8 623 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 CDKL4Q5MAI5 379 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 QSOX2Q6ZRP7 698 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 RAPH1Q70E73 1250 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.48■■□□□ 1.35
HLA-C-204ENST00000415537 CYP4X1Q8N118 509 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 SMIM10Q96HG1 83 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 SLX1AQ9BQ83 275 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 PITHD1Q9GZP4 211 aaPredicted RBP23.48■■□□□ 1.35
HLA-C-204ENST00000415537 DNAJC11Q9NVH1 559 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 RNF112Q9ULX5 631 aa23.48■■□□□ 1.35
HLA-C-204ENST00000415537 WIPF3A6NGB9 483 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 ANKDD1BA6NHY2 528 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 GGT5P36269 586 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 SLC26A5P58743 744 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 BTN3A2P78410 334 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 BEST3Q8N1M1 668 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 SLC5A8Q8N695 610 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 SNX31Q8N9S9 440 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 ARMC2Q8NEN0 867 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 GAL3ST3Q96A11 431 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 TAAR6Q96RI8 345 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 TMEM79Q9BSE2 394 aa23.47■■□□□ 1.35
HLA-C-204ENST00000415537 TAPBPO15533 448 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 UTP20O75691 2785 aaKnown RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 STK16O75716 305 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 CRYABP02511 175 aaKnown RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 HPDP32754 393 aaPredicted RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 HSPA7P48741 367 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 BTG2P78543 158 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 CKAP4Q07065 602 aaKnown RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 SPTAN1Q13813 2472 aaKnown RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 SLMAPQ14BN4 828 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 OR4D1Q15615 310 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 ZKSCAN8Q15776 578 aaPredicted RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 FBXO48Q5FWF7 155 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 CRLF3Q8IUI8 442 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 FBF1Q8TES7 1133 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 NR4A3Q92570 626 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 KIAA1191Q96A73 305 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 SEC16BQ96JE7 1060 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 UBXN10Q96LJ8 280 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 UTP23Q9BRU9 249 aaKnown RBP23.46■■□□□ 1.35
HLA-C-204ENST00000415537 NT5DC2Q9H857 520 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 PRDM9Q9NQV7 894 aa23.46■■□□□ 1.35
HLA-C-204ENST00000415537 A0A088AWK7 358 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 FAM155BO75949 473 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 C1QAP02745 245 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 ZNF10P21506 573 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-204ENST00000415537 TRADDQ15628 312 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 ZNF766Q5HY98 468 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 ZNF324BQ6AW86 544 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-204ENST00000415537 HIST2H2BCQ6DN03 193 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 ZNF572Q7Z3I7 529 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-204ENST00000415537 CA13Q8N1Q1 262 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 DNAJB8Q8NHS0 232 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 EXT2Q93063 718 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 ESAMQ96AP7 390 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 EHD1Q9H4M9 534 aa23.45■■□□□ 1.34
HLA-C-204ENST00000415537 LRIT2A6NDA9 550 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 FAM227AF5H4B4 570 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 LRRTM2O43300 516 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 ERI3O43414 337 aaKnown RBP23.44■■□□□ 1.34
HLA-C-204ENST00000415537 CCNT2O60583 730 aaKnown RBP23.44■■□□□ 1.34
HLA-C-204ENST00000415537 MAOAP21397 527 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 PER3P56645 1201 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 NAB1Q13506 487 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 PDK4Q16654 411 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 XKR6Q5GH73 641 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 C8orf74Q6P047 294 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 ZDHHC24Q6UX98 284 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 TBC1D1Q86TI0 1168 aaPredicted RBP23.44■■□□□ 1.34
HLA-C-204ENST00000415537 PDPRQ8NCN5 879 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 STAG3L4Q8TBR4 150 aa23.44■■□□□ 1.34
HLA-C-204ENST00000415537 MS4A6EQ96DS6 147 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms