RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.41□□□□□ -0.9
CD44-206ENST00000415148 RAB33AQ14088 237 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 CYP27C1Q4G0S4 372 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 NLRP8Q86W28 1048 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 TCEAL8Q8IYN2 117 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 NAGSQ8N159 534 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 NEDD4LQ96PU5 975 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 CHCHD6Q9BRQ6 235 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 TMEM38AQ9H6F2 299 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 BRD9Q9H8M2 597 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 ERVK13-1Q9NX77 482 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.41□□□□□ -0.9
CD44-206ENST00000415148 ANKRD34BA5PLL1 514 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 MGAT4DA6NG13 374 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 CTDSP2O14595 271 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 HAT1O14929 419 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 DYRK3O43781 588 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 SH3BGRLO75368 114 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 MED26O95402 600 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 SOD2P04179 222 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 CD70P32970 193 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 RPL3P39023 403 aaKnown RBP9.41□□□□□ -0.9
CD44-206ENST00000415148 RGS6P49758 472 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 DCDC1P59894 354 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 DMPKQ09013 629 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 FCHO2Q0JRZ9 810 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 TIMM50Q3ZCQ8 353 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 C19orf48Q6RUI8 117 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 ZNF367Q7RTV3 350 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 STX19Q8N4C7 294 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 SLC5A8Q8N695 610 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 SPPL2AQ8TCT8 520 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 REPS1Q96D71 796 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 LMLNQ96KR4 655 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 MTERF1Q99551 399 aaKnown RBP9.41□□□□□ -0.9
CD44-206ENST00000415148 MAPKAP1Q9BPZ7 522 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 CDCA4Q9BXL8 241 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 ZNF556Q9HAH1 456 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 SGK2Q9HBY8 427 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 MOV10Q9HCE1 1003 aaKnown RBP9.41□□□□□ -0.9
CD44-206ENST00000415148 ZNF226Q9NYT6 803 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 CNOT2Q9NZN8 540 aaKnown RBP9.41□□□□□ -0.9
CD44-206ENST00000415148 RAPGEFL1Q9UHV5 662 aa9.41□□□□□ -0.9
CD44-206ENST00000415148 ARRDC5A6NEK1 342 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 EFCAB10A6NFE3 127 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 E7EQ34 232 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 LOC110117498-PIK3R3F6TDL0 507 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 PRRG1O14668 218 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 ASNA1O43681 348 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 GUCY1B2O75343 617 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 HLA-EP13747 358 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 SOX6P35712 828 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 TGM4P49221 684 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 SLC7A9P82251 487 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 ARMCX4Q5H9R4 360 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 CRB2Q5IJ48 1285 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 TXNDC8Q6A555 127 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 THOC7Q6I9Y2 204 aaKnown RBP9.4□□□□□ -0.9
CD44-206ENST00000415148 C22orf39Q6P5X5 142 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 AGTRAPQ6RW13 159 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 RFLNAQ6ZTI6 216 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 MMAAQ8IVH4 418 aaKnown RBP9.4□□□□□ -0.9
CD44-206ENST00000415148 SLC30A8Q8IWU4 369 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 CACTIN-AS1Q8N1I8 211 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 CYP4Z2PQ8N1L4 340 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 C1orf52Q8N6N3 182 aaKnown RBP9.4□□□□□ -0.9
CD44-206ENST00000415148 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 OR52N2Q8NGI0 321 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 OR4A15Q8NGL6 344 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 OR56A3Q8NH54 315 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 OR52J3Q8NH60 311 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 PIK3R3Q92569 461 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 BHMTQ93088 406 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 OR5M11Q96RB7 305 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 YME1L1Q96TA2 773 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 KCNS3Q9BQ31 491 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 BBS2Q9BXC9 721 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 IL21Q9HBE4 155 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 MRPL17Q9NRX2 175 aaKnown RBP9.4□□□□□ -0.9
CD44-206ENST00000415148 N6AMT1Q9Y5N5 214 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 COL4A6Q14031 1691 aa9.4□□□□□ -0.9
CD44-206ENST00000415148 ALPK3Q96L96 1907 aa9.4□□□□□ -0.91
CD44-206ENST00000415148 CCDC88CQ9P219 2028 aa9.4□□□□□ -0.91
CD44-206ENST00000415148 H3BQ06 376 aaPredicted RBP9.39□□□□□ -0.91
CD44-206ENST00000415148 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 HOXC11O43248 304 aaPredicted RBP9.39□□□□□ -0.91
CD44-206ENST00000415148 SGTAO43765 313 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 CYP7B1O75881 506 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 OPN1SWP03999 348 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 HSMCR30P0CW71 290 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 ADORA3P0DMS8 318 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 TIA1P31483 386 aaKnown RBP eCLIP9.39□□□□□ -0.91
CD44-206ENST00000415148 MVDP53602 400 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 UGT2B15P54855 530 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 DEFA1P59665 94 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 DEFA3P59666 94 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
CD44-206ENST00000415148 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms