RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GALNT8Q9NY28 637 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 M0R3G1 203 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GPR39O43194 453 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 LATO43561 262 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 KLK1P06870 262 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 DHRS4L1P0CG22 281 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ZCCHC18P0CG32 403 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GABRG2P18507 467 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ATP6V1B2P21281 511 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 IFNGR2P38484 337 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 PIK3CBP42338 1070 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SMIM11AP58511 58 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TFF2Q03403 129 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 NR0B2Q15466 257 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 AGBL4Q5VU57 503 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CCDC81Q6ZN84 652 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 PTERQ96BW5 349 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 RNF145Q96MT1 663 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM168Q9H0V1 697 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 S1PR5Q9H228 398 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 OR51B5Q9H339 312 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GTF2A1LQ9UNN4 478 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 A0A1W2PPC4 97 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 A0A1W2PRB8 838 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CTSLP07711 333 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 AK4P27144 223 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GABRB3P28472 473 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CNR2P34972 360 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GRIA3P42263 894 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 KCNC1P48547 511 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ZNF763Q0D2J5 394 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SYVN1Q86TM6 617 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM126BQ8IUX1 230 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SVOPQ8N4V2 548 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ADAMTS18Q8TE60 1221 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 RHBDD1Q8TEB9 315 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ZFPM2Q8WW38 1151 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 KCNC2Q96PR1 638 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 BCL2L14Q9BZR8 327 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 IMPAD1Q9NX62 359 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CFL2Q9Y281 166 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 OR52A4PA6NMU1 304 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 C1orf105O95561 183 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 HBQ1P09105 142 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 CLCN7P51798 805 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ACY1Q03154 408 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SIGLEC14Q08ET2 396 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GRIK2Q13002 908 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TUBA3CQ13748 450 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GRM7Q14831 915 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 PTPRRQ15256 657 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TOMM20Q15388 145 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 RPE65Q16518 533 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 DUOXA1Q1HG43 343 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 ARHGAP40Q5TG30 622 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 RSBN1Q5VWQ0 802 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-211ENST00000413186 GRHL2Q6ISB3 625 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 C10orf53Q8N6V4 93 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 C11orf65Q8NCR3 313 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 TPD52L3Q96J77 140 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 PPM1MQ96MI6 270 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SEPHS2Q99611 448 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 NPAS2Q99743 824 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 C17orf62Q9BQA9 187 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 EBF4Q9BQW3 602 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SAV1Q9H4B6 383 aaPredicted RBP8.2□□□□□ -1.1
SYNE1-211ENST00000413186 C3orf18Q9UK00 162 aa8.2□□□□□ -1.1
SYNE1-211ENST00000413186 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 METTL21EPA6NDL7 271 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 DUXAA6NLW8 204 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 MAGEB17A8MXT2 336 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 FAM220BPB1ANY3 271 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 G3V2L1 256 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SLC28A2O43868 658 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 NPPAP01160 153 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PSMD4P55036 377 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 RAB8AP61006 207 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PPP2CAP67775 309 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 DEFB133Q30KQ1 61 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 C1orf189Q5VU69 101 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM215Q68D42 235 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PAOXQ6QHF9 649 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 RASSF6Q6ZTQ3 369 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CADM4Q8NFZ8 388 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 OR13H1Q8NG92 308 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 OR5K2Q8NHB8 316 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SLC6A18Q96N87 628 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ATOH8Q96SQ7 321 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 FAM120CQ9NX05 1096 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 C19orf25Q9UFG5 118 aaPredicted RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 MUTYHQ9UIF7 546 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CA5BQ9Y2D0 317 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TPRKBQ9Y3C4 175 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ZNF638Q14966 1978 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM233B4DJY2 109 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ANHXE9PGG2 379 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SAP18O00422 153 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PLOD2O00469 737 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms