RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ATXN2Q99700 1313 aaKnown RBP4.19□□□□□ -1.74
BRCA1-204ENST00000412061 PIK3R4Q99570 1358 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 TRAV18A0A075B6X5 111 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 LINC00854A0A1B0GVQ3 168 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 GSAPA4D1B5 854 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 GOLGA8OA6NCC3 632 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF716A6NP11 495 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 GOLGA8NF8WBI6 632 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 M0R296 226 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 LGALS8O00214 317 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 DVL1O14640 695 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 SCO2O43819 266 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 NDUFS7O75251 213 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 RHBDL1O75783 438 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 OR4F21O95013 312 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 BMP10O95393 424 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 MBD3O95983 291 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 LDLRP01130 860 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF735P0CB33 412 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CYP3A5P20815 502 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 S1PR1P21453 382 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 C21orf33P30042 268 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 STIP1P31948 543 aaKnown RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 NUMBP49757 651 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CCL11P51671 97 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 HERV-K104P63124 156 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 MYBPC1Q00872 1141 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CNTN2Q02246 1040 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 SLC3A1Q07837 685 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF415Q09FC8 603 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 FUT7Q11130 342 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 DMP1Q13316 513 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CDH18Q13634 790 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 UGT3A2Q3SY77 523 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 RAB6CQ53S08 254 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 EFHC1Q5JVL4 640 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 UGT3A1Q6NUS8 523 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 FUT10Q6P4F1 479 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 BNIPLQ7Z465 357 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 NANOGNBQ7Z5D8 188 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 NBPF5PQ86XG9 351 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 PHC2Q8IXK0 858 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 NIPA2Q8N8Q9 360 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 BHLHE23Q8NDY6 225 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 OR52K1Q8NGK4 314 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 OR14A16Q8NHC5 309 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 RNF128Q8TEB7 428 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CHPT1Q8WUD6 406 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 RLN3Q8WXF3 142 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 LGALS12Q96DT0 336 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 MARK4Q96L34 752 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 GPR137Q96N19 417 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 GUCD1Q96NT3 240 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ALG12Q9BV10 488 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 MRPL13Q9BYD1 178 aaKnown RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CRNKL1Q9BZJ0 848 aaKnown RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 RAB6CQ9H0N0 254 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 RIMS4Q9H426 269 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 METTL7AQ9H8H3 244 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 EVA1AQ9H8M9 152 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 COG4Q9H9E3 785 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ACKR4Q9NPB9 350 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ETNK2Q9NVF9 386 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 TBC1D13Q9NVG8 400 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 GDAP2Q9NXN4 497 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 NARFQ9UHQ1 456 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 AGO1Q9UL18 857 aaKnown RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 DLGAP4Q9Y2H0 992 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 TMED7Q9Y3B3 224 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ATG4BQ9Y4P1 393 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 YIPF1Q9Y548 306 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 SF3B1O75533 1304 aaKnown RBP eCLIP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF521Q96K83 1311 aa4.18□□□□□ -1.74
BRCA1-204ENST00000412061 COL3A1P02461 1466 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-204ENST00000412061 CACNA1IQ9P0X4 2223 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 RAD54L2Q9Y4B4 1467 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SERTM2A0A1B0GWG4 89 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 MED19A0JLT2 244 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 OGTO15294 1046 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SNNO75324 88 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SERPINI2O75830 405 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 PIGNO95427 931 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 SYNGR4O95473 234 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 TOMM40O96008 361 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 FGF4P08620 206 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 UQCRFS1P1P0C7P4 283 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 CEACAM1P13688 526 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ANXA8P13928 327 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 HTR2AP28223 471 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 CHI3L1P36222 383 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 MNDAP41218 407 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 MAGEA11P43364 429 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 TNFRSF4P43489 277 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 TNFSF10P50591 281 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 PGGT1BP53609 377 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 KCNK10P57789 538 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 NLRP11P59045 1033 aaKnown RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 ABATP80404 500 aa4.17□□□□□ -1.74
BRCA1-204ENST00000412061 HADHQ16836 314 aaKnown RBP4.17□□□□□ -1.74
BRCA1-204ENST00000412061 AMZ1Q400G9 498 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms