RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DOC2AQ14183 400 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 EIF2S3LQ2VIR3 472 aaKnown RBP16.66■□□□□ 0.26
LSM5-204ENST00000409909 SFT2D3Q587I9 215 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 MROH9Q5TGP6 573 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 PLAG1Q6DJT9 500 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 ADNP2Q6IQ32 1131 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 NIPAL1Q6NVV3 410 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 VN1R5Q7Z5H4 357 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 RELL1Q8IUW5 271 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 STAG3L4Q8TBR4 150 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 HAS2Q92819 552 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 EXT2Q93063 718 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 NXNL1Q96CM4 212 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 ATOH8Q96SQ7 321 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 EHD1Q9H4M9 534 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 NT5DC2Q9H857 520 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 NMRAL1Q9HBL8 299 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 LRIT2A6NDA9 550 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 FAM227AF5H4B4 570 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 F10P00742 488 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 LTA4HP09960 611 aaKnown RBP16.65■□□□□ 0.26
LSM5-204ENST00000409909 ECHS1P30084 290 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 TNFSF10P50591 281 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 SKP1P63208 163 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 ARG2P78540 354 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 BTG2P78543 158 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 IRF9Q00978 393 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 PDK4Q16654 411 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 BTBD16Q32M84 506 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 TBC1D1Q86TI0 1168 aaPredicted RBP16.65■□□□□ 0.26
LSM5-204ENST00000409909 CENPLQ8N0S6 344 aaPredicted RBP16.65■□□□□ 0.26
LSM5-204ENST00000409909 KRT78Q8N1N4 520 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 SNX31Q8N9S9 440 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 OR1N1Q8NGS0 311 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 KCTD4Q8WVF5 259 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 IFT81Q8WYA0 676 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 MS4A6EQ96DS6 147 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 WDR34Q96EX3 536 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 SLC29A3Q9BZD2 475 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 CD244Q9BZW8 370 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 CLK4Q9HAZ1 481 aaKnown RBP16.65■□□□□ 0.26
LSM5-204ENST00000409909 ACOT9Q9Y305 439 aa16.65■□□□□ 0.26
LSM5-204ENST00000409909 SPTBN1Q01082 2364 aaKnown RBP16.65■□□□□ 0.26
LSM5-204ENST00000409909 A0A0G2JN53 185 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 DYTNA2CJ06 578 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 UBXN8O00124 270 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 CLGNO14967 610 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 CCNT2O60583 730 aaKnown RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 KERAO60938 352 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 SEMA7AO75326 666 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 WDPCPO95876 746 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 C2P06681 752 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 MTHFD2P13995 350 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 STXBP1P61764 594 aaKnown RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 AP2B1P63010 937 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 BTN3A2P78410 334 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 ACTN3Q08043 901 aaPredicted RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 XKR6Q5GH73 641 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 H3F3CQ6NXT2 135 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 PAPD4Q6PIY7 484 aaKnown RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 CA13Q8N1Q1 262 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 MNS1Q8NEH6 495 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 TTLQ8NG68 377 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 GRHL3Q8TE85 626 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 GAL3ST3Q96A11 431 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 PTCD3Q96EY7 689 aaKnown RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 FUT8Q9BYC5 575 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 PITHD1Q9GZP4 211 aaPredicted RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 RHBGQ9H310 441 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 ACSS3Q9H6R3 686 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 SNX15Q9NRS6 342 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 NUDT4Q9NZJ9 180 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 MTRF1LQ9UGC7 380 aaKnown RBP16.64■□□□□ 0.25
LSM5-204ENST00000409909 POLEQ07864 2286 aa16.64■□□□□ 0.25
LSM5-204ENST00000409909 MAST4O15021 2626 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 CYSRT1A8MQ03 144 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 A8MUI8 341 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 SUPT3HB4E1H0 165 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 PRMT3O60678 531 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 SUPT3HO75486 399 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 CLEC3AO75596 197 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 ALDOAP04075 364 aaKnown RBP16.63■□□□□ 0.25
LSM5-204ENST00000409909 S100BP04271 92 aaPredicted RBP16.63■□□□□ 0.25
LSM5-204ENST00000409909 CTAGE8P0CG41 777 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 RNH1P13489 461 aaKnown RBP16.63■□□□□ 0.25
LSM5-204ENST00000409909 MAOAP21397 527 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 JAK1P23458 1154 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 OR4D2P58180 307 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 ZNF33BQ06732 778 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 RUNX2Q13950 521 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
LSM5-204ENST00000409909 ADPRMQ3LIE5 342 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 FHL5Q5TD97 284 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 FCRLBQ6BAA4 426 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 CTAGE4Q8IX94 777 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 PRR7Q8TB68 274 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 M1APQ8TC57 530 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 CCT6BQ92526 530 aa16.63■□□□□ 0.25
LSM5-204ENST00000409909 SEC16BQ96JE7 1060 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms