RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LINC00862A6NCI5 91 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 KRT87PA6NCN2 255 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 SLC15A5A6NIM6 579 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ZNF487B1APH4 448 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 H7C4K7 107 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TRIM77I1YAP6 450 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 CTDSP2O14595 271 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 MBTPS2O43462 519 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 PIP5K1CO60331 668 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ENTPD3O75355 529 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TULP3O75386 442 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 UGT2B17O75795 530 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 CABYRO75952 493 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 CNTN5O94779 1100 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 CFIP05156 583 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ELANEP08246 267 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 SNHG28P0DPA3 235 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 PSKH1P11801 424 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TPH1P17752 444 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ALOX12P18054 663 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 LRPAP1P30533 357 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 SPRP35270 261 aaPredicted RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 ETV6P41212 452 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 HNF4AP41235 474 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 HCAR3P49019 387 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 SELENOPP49908 381 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ANXA11P50995 505 aaKnown RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 ZNF134P52741 427 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 MAPK12P53778 367 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 UGT2B15P54855 530 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 RPS6P62753 249 aaKnown RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 MC2RQ01718 297 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 GABPAQ06546 454 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 FASTKQ14296 549 aaKnown RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 TAB1Q15750 504 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TBRG1Q3YBR2 411 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 RABL3Q5HYI8 236 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 COQ5Q5HYK3 327 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 C6orf141Q5SZD1 244 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ZNF782Q6ZMW2 699 aaPredicted RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 DPY19L3Q6ZPD9 716 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 PIWIL3Q7Z3Z3 882 aaKnown RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 R3HCC1LQ7Z5L2 792 aaKnown RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 TLK2Q86UE8 772 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ZNF280BQ86YH2 543 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 GATAD2AQ86YP4 633 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 CDKL3Q8IVW4 592 aaPredicted RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 METTL4Q8N3J2 472 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 Q8NA96 180 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 FNDC5Q8NAU1 212 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 SETD9Q8NE22 299 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 OR10T2Q8NGX3 314 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 DNAJA4Q8WW22 397 aaPredicted RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 SH3KBP1Q96B97 665 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 LOXL4Q96JB6 756 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ST6GAL2Q96JF0 529 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ELMO2Q96JJ3 720 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 NPAS2Q99743 824 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ZNF577Q9BSK1 485 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 FEM1AQ9BSK4 669 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 DGCR6LQ9BY27 220 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 FAM49AQ9H0Q0 323 aaPredicted RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 PORCNQ9H237 461 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 PLEKHA5Q9HAU0 1116 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 LRRC4Q9HBW1 653 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 WASH6PQ9NQA3 447 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 POLE4Q9NR33 117 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 AURKAIP1Q9NWT8 199 aaPredicted RBP5.27□□□□□ -1.57
CLK1-202ENST00000409403 TAS2R9Q9NYW1 312 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 USE1Q9NZ43 259 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 EMC3Q9P0I2 261 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 SLC9A2Q9UBY0 812 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 GLS2Q9UI32 602 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 KLHL21Q9UJP4 597 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 OSGIN1Q9UJX0 560 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 STAP1Q9ULZ2 295 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TRAPPC4Q9Y296 219 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 NDUFAF1Q9Y375 327 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TPRKBQ9Y3C4 175 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ORC6Q9Y5N6 252 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 MYO9AB2RTY4 2548 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 ITPR3Q14573 2671 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 MYO7AQ13402 2215 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 CFAP46Q8IYW2 2715 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 A0A087WZ62 844 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 PRAMEF33A0A0G2JMD5 474 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 A0A1W2PS29 197 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 GAGE12BA1L429 117 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 FAM234BA2RU67 622 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 GAGE12HA6NDE8 117 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 PRORSD1PA6NEY8 169 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 C3orf70A6NLC5 250 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 OR5K4A6NMS3 321 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 UBXN8O00124 270 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 TOR1AO14656 332 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 TFECO14948 347 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 PRAMEF10O60809 474 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 USP12O75317 370 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 PIAS1O75925 651 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms