RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RPS6KA1Q15418 735 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 QSOX2Q6ZRP7 698 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 C17orf64Q86WR6 236 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 PRIMA1Q86XR5 153 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 AFAP1L2Q8N4X5 818 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 MFSD9Q8NBP5 474 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 PSD4Q8NDX1 1056 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 OR2M7Q8NG81 312 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 GIMAP7Q8NHV1 300 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 ALKBH8Q96BT7 664 aaKnown RBP15.53■□□□□ 0.08
CHMP3-203ENST00000409225 MFSD3Q96ES6 412 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 ATG10Q9H0Y0 220 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 ZDHHC11Q9H8X9 412 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 JMJD1CQ15652 2540 aa15.53■□□□□ 0.08
CHMP3-203ENST00000409225 FN1P02751 2386 aaKnown RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 A0A0G2JMM0 328 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 A0A1W2PPB8 328 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 A0A1W2PRS3 328 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 TCRBV16S1A1N1A0A5B0 115 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 GRID2IPA4D2P6 1211 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 KIR3DP1A8MWS1 328 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 G3V3Y1 287 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 ATE1O95260 518 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 SERPIND1P05546 499 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 F7P08709 466 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 CDH1P12830 882 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 ALOX12P18054 663 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 GRK3P35626 688 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 SSR4P51571 173 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 ADARP55265 1226 aaKnown RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 MEF2AQ02078 507 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 KEAP1Q14145 624 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 OASLQ15646 514 aaKnown RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 TTLL9Q3SXZ7 439 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 UBE2R2Q712K3 238 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 UBL4BQ8N7F7 174 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 LRRC57Q8N9N7 239 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 APCDD1LQ8NCL9 501 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 NUDT8Q8WV74 236 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 ARSGQ96EG1 525 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 CALR3Q96L12 384 aaKnown RBP15.52■□□□□ 0.08
CHMP3-203ENST00000409225 TCF12Q99081 682 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 TTTY12Q9BZ98 90 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 FAM129AQ9BZQ8 928 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 IL22Q9GZX6 179 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 NECTIN3Q9NQS3 549 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 AMFRQ9UKV5 643 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 CBLCQ9ULV8 474 aa15.52■□□□□ 0.08
CHMP3-203ENST00000409225 OR14I1A6ND48 311 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 A8MVJ9 347 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 GFYI3L273 518 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 LIASO43766 372 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 CEP104O60308 925 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 MYO1DO94832 1006 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 HEXAP06865 529 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 MPC1LP0DKB6 136 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 MGAT1P26572 445 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 CYLC1P35663 651 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-203ENST00000409225 TBX2Q13207 712 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-203ENST00000409225 FLYWCH1Q4VC44 716 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 C1orf185Q5T7R7 199 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 FBXW10Q5XX13 1052 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 C16orf47Q6ZP98 133 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-203ENST00000409225 KIAA0408Q6ZU52 694 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 PEX26Q7Z412 305 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 SLC22A16Q86VW1 577 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 CCDC170Q8IYT3 715 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 B3GNT7Q8NFL0 401 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 PCBD2Q9H0N5 130 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 RHBGQ9H310 441 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 LIN28AQ9H9Z2 209 aaKnown RBP15.51■□□□□ 0.07
CHMP3-203ENST00000409225 PRDM9Q9NQV7 894 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 HPF1Q9NWY4 346 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 SYBUQ9NX95 663 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 ALKBH4Q9NXW9 302 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 BFARQ9NZS9 450 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 ACAD8Q9UKU7 415 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF148Q9UQR1 794 aa15.51■□□□□ 0.07
CHMP3-203ENST00000409225 DRG1Q9Y295 367 aaKnown RBP15.51■□□□□ 0.07
CHMP3-203ENST00000409225 IGKV3D-11A0A0A0MRZ8 115 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 ZSCAN5DPP0CG00 497 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF888P0CJ79 500 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-203ENST00000409225 OGNP20774 298 aaKnown RBP15.5■□□□□ 0.07
CHMP3-203ENST00000409225 MAGEA5P43359 124 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 NPY2RP49146 381 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 SKP1P63208 163 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 IL20RBQ6UXL0 311 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 CYHR1Q6ZMK1 362 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 MBOAT1Q6ZNC8 495 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 RGS9BPQ6ZS82 235 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 CHSY3Q70JA7 882 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 CENPUQ71F23 418 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 TRILQ7L0X0 811 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 PIWIL4Q7Z3Z4 852 aaKnown RBP15.5■□□□□ 0.07
CHMP3-203ENST00000409225 CCDC89Q8N998 374 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 TC2NQ8N9U0 490 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 ARMC2Q8NEN0 867 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 FAM222BQ8WU58 562 aa15.5■□□□□ 0.07
CHMP3-203ENST00000409225 SREK1Q8WXA9 508 aaKnown RBP15.5■□□□□ 0.07
CHMP3-203ENST00000409225 NCLNQ969V3 563 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms