RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CDCP1Q9H5V8 836 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 IL1RAPQ9NPH3 570 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 SEMA3GQ9NS98 782 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GREB1Q4ZG55 1949 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 RP1P56715 2156 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CENPXA8MT69 81 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 H0YJX3 145 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 PPM1DO15297 605 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ZW10O43264 779 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GUCY1B2O75343 617 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CCNDBP1O95273 360 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 MAPK1P28482 360 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 HMGCLP35914 325 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CDC42P60953 191 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ID2Q02363 134 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ELP6Q0PNE2 266 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GPR17Q13304 367 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 IL18Q14116 193 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CRTC2Q53ET0 693 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 GPAT3Q53EU6 434 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 FCRLBQ6BAA4 426 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 TMEM25Q86YD3 366 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ZZZ3Q8IYH5 903 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 KCT2Q8NC54 265 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 PDPRQ8NCN5 879 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 OR8J3Q8NGG0 315 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GATAD2BQ8WXI9 593 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 MGLLQ99685 303 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 HDHD5Q9BXW7 423 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ZNF334Q9HCZ1 680 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 RPRD1BQ9NQG5 326 aaKnown RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 QPCTLQ9NXS2 382 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 MRPL15Q9P015 296 aaKnown RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 DYRK1BQ9Y463 629 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 C2orf92A0A1B0GVN3 265 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ILVBLA1L0T0 632 aa8□□□□□ -1.13
SNX13-201ENST00000409076 TTC34A8MYJ7 566 aa8□□□□□ -1.13
SNX13-201ENST00000409076 PRAMEF4O60810 478 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ERN1O75460 977 aaKnown RBP8□□□□□ -1.13
SNX13-201ENST00000409076 KCNK2O95069 426 aa8□□□□□ -1.13
SNX13-201ENST00000409076 HOXB8P17481 243 aaPredicted RBP8□□□□□ -1.13
SNX13-201ENST00000409076 LHCGRP22888 699 aa8□□□□□ -1.13
SNX13-201ENST00000409076 SLC15A1P46059 708 aa8□□□□□ -1.13
SNX13-201ENST00000409076 AVPR1BP47901 424 aa8□□□□□ -1.13
SNX13-201ENST00000409076 EPHB3P54753 998 aa8□□□□□ -1.13
SNX13-201ENST00000409076 HBA1P69905 142 aa8□□□□□ -1.13
SNX13-201ENST00000409076 GBX1Q14549 363 aa8□□□□□ -1.13
SNX13-201ENST00000409076 GRIN2CQ14957 1233 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ZNF750Q32MQ0 723 aa8□□□□□ -1.13
SNX13-201ENST00000409076 MORN1Q5T089 497 aa8□□□□□ -1.13
SNX13-201ENST00000409076 PRAMEF9Q5VWM5 478 aa8□□□□□ -1.13
SNX13-201ENST00000409076 CST9Q5W186 159 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ERAP2Q6P179 960 aa8□□□□□ -1.13
SNX13-201ENST00000409076 C8orf82Q6P1X6 216 aaPredicted RBP8□□□□□ -1.13
SNX13-201ENST00000409076 CEACAM20Q6UY09 585 aa8□□□□□ -1.13
SNX13-201ENST00000409076 PTRH1Q86Y79 214 aaKnown RBP8□□□□□ -1.13
SNX13-201ENST00000409076 CCDC71Q8IV32 467 aaPredicted RBP8□□□□□ -1.13
SNX13-201ENST00000409076 SLC9A6Q92581 669 aa8□□□□□ -1.13
SNX13-201ENST00000409076 MYDGFQ969H8 173 aa8□□□□□ -1.13
SNX13-201ENST00000409076 FAM83DQ9H4H8 585 aa8□□□□□ -1.13
SNX13-201ENST00000409076 CLMPQ9H6B4 373 aa8□□□□□ -1.13
SNX13-201ENST00000409076 HEBP1Q9NRV9 189 aa8□□□□□ -1.13
SNX13-201ENST00000409076 MRPL17Q9NRX2 175 aaKnown RBP8□□□□□ -1.13
SNX13-201ENST00000409076 TBCCD1Q9NVR7 557 aa8□□□□□ -1.13
SNX13-201ENST00000409076 TMEM9Q9P0T7 183 aa8□□□□□ -1.13
SNX13-201ENST00000409076 LHX3Q9UBR4 397 aa8□□□□□ -1.13
SNX13-201ENST00000409076 FBXW2Q9UKT8 454 aa8□□□□□ -1.13
SNX13-201ENST00000409076 PCDHB1Q9Y5F3 818 aa8□□□□□ -1.13
SNX13-201ENST00000409076 FAM186AA6NE01 2351 aa8□□□□□ -1.13
SNX13-201ENST00000409076 CASKO14936 926 aa8□□□□□ -1.13
SNX13-201ENST00000409076 TOXO94900 526 aa8□□□□□ -1.13
SNX13-201ENST00000409076 IL3P08700 152 aa8□□□□□ -1.13
SNX13-201ENST00000409076 NR2F1P10589 423 aa8□□□□□ -1.13
SNX13-201ENST00000409076 MAT2AP31153 395 aaKnown RBP8□□□□□ -1.13
SNX13-201ENST00000409076 NSG1P42857 185 aa8□□□□□ -1.13
SNX13-201ENST00000409076 CSNK2BP67870 215 aa8□□□□□ -1.13
SNX13-201ENST00000409076 PCBP1Q15365 356 aaKnown RBP eCLIP8□□□□□ -1.13
SNX13-201ENST00000409076 SNAPC1Q16533 368 aa8□□□□□ -1.13
SNX13-201ENST00000409076 GTF2IRD2BQ6EKJ0 949 aa8□□□□□ -1.13
SNX13-201ENST00000409076 TMPRSS11AQ6ZMR5 421 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ZNF467Q7Z7K2 595 aaPredicted RBP8□□□□□ -1.13
SNX13-201ENST00000409076 GTF2IRD2Q86UP8 949 aa8□□□□□ -1.13
SNX13-201ENST00000409076 GALNT12Q8IXK2 581 aa8□□□□□ -1.13
SNX13-201ENST00000409076 CADM2Q8N3J6 435 aa8□□□□□ -1.13
SNX13-201ENST00000409076 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
SNX13-201ENST00000409076 STARD8Q92502 1023 aa8□□□□□ -1.13
SNX13-201ENST00000409076 UCN3Q969E3 161 aa8□□□□□ -1.13
SNX13-201ENST00000409076 SLC38A4Q969I6 547 aa8□□□□□ -1.13
SNX13-201ENST00000409076 AP2M1Q96CW1 435 aa8□□□□□ -1.13
SNX13-201ENST00000409076 OMA1Q96E52 524 aa8□□□□□ -1.13
SNX13-201ENST00000409076 WACQ9BTA9 647 aa8□□□□□ -1.13
SNX13-201ENST00000409076 SLC52A3Q9NQ40 469 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ANGPT4Q9Y264 503 aa8□□□□□ -1.13
SNX13-201ENST00000409076 OARD1Q9Y530 152 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ENTPD6O75354 484 aa8□□□□□ -1.13
SNX13-201ENST00000409076 KCNK5O95279 499 aa8□□□□□ -1.13
SNX13-201ENST00000409076 ELFN1P0C7U0 828 aa8□□□□□ -1.13
SNX13-201ENST00000409076 EBLN1P0CF75 366 aa8□□□□□ -1.13
SNX13-201ENST00000409076 HOXD8P13378 290 aaPredicted RBP8□□□□□ -1.13
SNX13-201ENST00000409076 HOXC13P31276 330 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms