RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF860A6NHJ4 632 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 NCF1BA6NI72 391 aaPredicted RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 A8MUI8 341 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 NCF1CA8MVU1 366 aaPredicted RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CLDN4O14493 209 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PHGDHO43175 533 aaKnown RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CHST10O43529 356 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 B3GALT2O43825 422 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PRMT3O60678 531 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 JRKO75564 520 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 RASAL1O95294 804 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 NCF1P14598 390 aaPredicted RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CD1DP15813 335 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 RHAGQ02094 409 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 RBPJQ06330 500 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 SLBPQ14493 270 aaKnown RBP eCLIP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 TERF2Q15554 542 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 ZKSCAN8Q15776 578 aaPredicted RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 WHAMMP3Q1A5X7 153 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 EIF2S3LQ2VIR3 472 aaKnown RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 KBTBD12Q3ZCT8 623 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 C4orf17Q53FE4 359 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 TOR1AIP1Q5JTV8 583 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 H3F3CQ6NXT2 135 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 KLC3Q6P597 504 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 LANCL3Q6ZV70 420 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PRSS41Q7RTY9 318 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 SNX31Q8N9S9 440 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 TMEM178AQ8NBL3 297 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PDPRQ8NCN5 879 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 FBXO25Q8TCJ0 367 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 ANKRD49Q8WVL7 239 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CCT6BQ92526 530 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 KIAA1191Q96A73 305 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PTCD3Q96EY7 689 aaKnown RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PTCHD1Q96NR3 888 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CENPKQ9BS16 269 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 LANCL2Q9NS86 450 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 COPG2Q9UBF2 871 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 MTO1Q9Y2Z2 717 aaKnown RBP8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 CSAG2Q9Y5P2 127 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 SPACA6W5XKT8 324 aa8.55□□□□□ -1.04
SNORD88A-201ENST00000408314 DOPEY1Q5JWR5 2465 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 A0A087X1B8 175 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 SAGE2PA6NJ88 616 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 KIF2AO00139 706 aaPredicted RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 FCHO1O14526 889 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 ERI3O43414 337 aaKnown RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 B4GALT2O60909 372 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 KERAO60938 352 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 CDC123O75794 336 aaPredicted RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 WISP3O95389 354 aaPredicted RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 WDPCPO95876 746 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 LTA4HP09960 611 aaKnown RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 CD46P15529 392 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 HNF4AP41235 474 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 PIK3CGP48736 1102 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 CASP6P55212 293 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 HSD17B7P56937 341 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 SLC26A5P58743 744 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 RAB8AP61006 207 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 PHEXP78562 749 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 IRF8Q02556 426 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 TBCCQ15814 346 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 FAM83EQ2M2I3 478 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 ZXDCQ2QGD7 858 aaPredicted RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 XKR6Q5GH73 641 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 ACER2Q5QJU3 275 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 MTFR2Q6P444 385 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 SPNS2Q8IVW8 549 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 ANKRD53Q8N9V6 530 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 NR4A3Q92570 626 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 MOCOSQ96EN8 888 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 UBXN10Q96LJ8 280 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 CAB39LQ9H9S4 337 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 SMYD2Q9NRG4 433 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 OPTCQ9UBM4 332 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 SUCOQ9UBS9 1254 aaKnown RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 PLEKHB1Q9UF11 243 aaPredicted RBP8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 ADGRE2Q9UHX3 823 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 IKZF3Q9UKT9 509 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 ACOT9Q9Y305 439 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 IKBKGQ9Y6K9 419 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 HIVEP3Q5T1R4 2406 aa8.54□□□□□ -1.04
SNORD88A-201ENST00000408314 CPAMD8Q8IZJ3 1885 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 IGHV3-20A0A0C4DH32 117 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 TCRBV16S1A1N1A0A5B0 115 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CXorf49A8MYA2 514 aaPredicted RBP8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 SUPT3HB4E1H0 165 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 E2F3O00716 465 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 FANCGO15287 622 aa8.53□□□□□ -1.04
SNORD88A-201ENST00000408314 CCNT2O60583 730 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms