RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SAP18O00422 153 aaKnown RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 DIRAS1O95057 198 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 MSL3P1P0C860 447 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 ZNF14P17017 642 aaPredicted RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 HSD11B1P28845 292 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 STT3AP46977 705 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CD47Q08722 323 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 GINS1Q14691 196 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PQLC3Q8N755 202 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 ERVK-18Q9QC07 812 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 KLRG2A4D1S0 409 aaPredicted RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 DUSP11O75319 330 aaKnown RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 H2AFB2P0C5Z0 115 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CCL23P55773 120 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 NRG3P56975 720 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CEACAM7Q14002 265 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 LRRC32Q14392 662 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CHRNA6Q15825 494 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 ZDHHC14Q8IZN3 488 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PIP5K1AQ99755 562 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 FUNDC2Q9BWH2 189 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 TBL1XR1Q9BZK7 514 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 STUB1Q9UNE7 303 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 A0A0J9YVX5 310 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 OXSR1O95747 527 aaPredicted RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 HSD3B1P14060 373 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 UQCRC2P22695 453 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 HSD3B2P26439 372 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 SPHARQ15513 63 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 GDPD1Q8N9F7 314 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 NUS1Q96E22 293 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 AGAP5A6NIR3 686 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 SOX14O95416 240 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 VNN2O95498 520 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CELP19835 753 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 RBMXP38159 391 aaKnown RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 TUBB3Q13509 450 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 TPGS2Q68CL5 300 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CYP4V2Q6ZWL3 525 aaPredicted RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 LYSMD3Q7Z3D4 306 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 NPAS4Q8IUM7 802 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PDZD9Q8IXQ8 264 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CNIH3Q8TBE1 160 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 TSGA13Q96PP4 275 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 NPY6RQ99463 290 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PFDN5Q99471 154 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 REEP4Q9H6H4 257 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 CENPMQ9NSP4 180 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 AIG1Q9NVV5 245 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 NLE1Q9NVX2 485 aaPredicted RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 FARSAQ9Y285 508 aaKnown RBP12.54□□□□□ -0.4
RNF43-201ENST00000407977 NR2E3Q9Y5X4 410 aa12.54□□□□□ -0.4
RNF43-201ENST00000407977 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 FUOMA2VDF0 154 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 KIAA0513O60268 411 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 LEPRP48357 1165 aaKnown RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.53□□□□□ -0.46e-6■■■■□ 22.6
RNF43-201ENST00000407977 TMIGD1Q6UXZ0 262 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 HSDL2Q6YN16 418 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 Q9N2J8 555 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 F5H0A9 414 aaPredicted RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 HSPA12AO43301 675 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 IFNA2P01563 188 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 MAN2A2P49641 1150 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 PRSS48Q7RTY5 328 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 FAM124AQ86V42 546 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 FAM86B1Q8N7N1 296 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 ZNF565Q8N9K5 539 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 CD300LFQ8TDQ1 290 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 GRHL3Q8TE85 626 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 ANKRD60Q9BZ19 345 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 ABCG5Q9H222 651 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 FZD1Q9UP38 647 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 CREBL2O60519 120 aaPredicted RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 CSKP41240 450 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 NPRL3Q12980 569 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 TECRLQ5HYJ1 363 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 LIPJQ5W064 366 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 AGTRAPQ6RW13 159 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 DPY19L3Q6ZPD9 716 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
RNF43-201ENST00000407977 OR13J1Q8NGT2 312 aa12.53□□□□□ -0.4
RNF43-201ENST00000407977 HERC2P3Q9BVR0 1158 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms