RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ZCWPW2A0A1B0GU75 182 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 TCRBV16S1A1N1A0A5B0 115 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 MAGEB16A2A368 324 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 ITGA10O75578 1167 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 ZWINTO95229 277 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 CCND1P24385 295 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 HNF4AP41235 474 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 SLC1A2P43004 574 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 VPS41P49754 854 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 SKP1P63208 163 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 SARNPP82979 210 aaKnown RBP13.58□□□□□ -0.24
VAMP1-203ENST00000400911 TIAL1Q01085 375 aaKnown RBP eCLIP13.58□□□□□ -0.24
VAMP1-203ENST00000400911 GXYLT1Q4G148 440 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 ANKRD22Q5VYY1 191 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 ACAD11Q709F0 780 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 ABHD13Q7L211 337 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 PALM2Q8IXS6 379 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 APCDD1LQ8NCL9 501 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 OR5M9Q8NGP3 310 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 PYCR2Q96C36 320 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 SNF8Q96H20 258 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 HAUS8Q9BT25 410 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 AARSD1Q9BTE6 412 aaKnown RBP13.58□□□□□ -0.24
VAMP1-203ENST00000400911 SARGQ9BW04 601 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 RHBGQ9H310 441 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 PRDM9Q9NQV7 894 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 C20orf96Q9NUD7 363 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-203ENST00000400911 CCM2LQ9NUG4 571 aaPredicted RBP13.58□□□□□ -0.24
VAMP1-203ENST00000400911 KCMF1Q9P0J7 381 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 ZFATQ9P243 1243 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 TRMT6Q9UJA5 497 aaKnown RBP13.58□□□□□ -0.24
VAMP1-203ENST00000400911 FBXW2Q9UKT8 454 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 COMMD10Q9Y6G5 202 aa13.58□□□□□ -0.24
VAMP1-203ENST00000400911 VPS13CQ709C8 3753 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 IGKV3D-11A0A0A0MRZ8 115 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 TRBC2A0A5B9 178 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 CTAGE15A4D2H0 777 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 SDR42E2A6NKP2 422 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 NPIPA2E9PIF3 369 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 NPIPA3F8WFD2 350 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 PSMD12O00232 456 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-203ENST00000400911 EIF3FO00303 357 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-203ENST00000400911 MYO1DO94832 1006 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 C8GP07360 202 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 RAB8AP61006 207 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 PPIAP62937 165 aaKnown RBP13.57□□□□□ -0.24
VAMP1-203ENST00000400911 RGS1Q08116 209 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 PHKG1Q16816 387 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 CATSPEREQ5SY80 951 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 ARMC3Q5W041 872 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 NIPAL1Q6NVV3 410 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 CTAGE6Q86UF2 777 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 TGIF2LYQ8IUE0 185 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 CLYBLQ8N0X4 340 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 MMP21Q8N119 569 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 B3GNT7Q8NFL0 401 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 OR5M3Q8NGP4 307 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 OR10Q1Q8NGQ4 319 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 NT5CQ8TCD5 201 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 UTP15Q8TED0 518 aaKnown RBP13.57□□□□□ -0.24
VAMP1-203ENST00000400911 OR4K3Q96R72 315 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 NDNQ99608 321 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 FOXC2Q99958 501 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 CXXC4Q9H2H0 198 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 TIMMDC1Q9NPL8 285 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 PNPLA3Q9NST1 481 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 DEPPQ9NTK1 212 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 FBXO5Q9UKT4 447 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 GUCA1BQ9UMX6 200 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 ZKSCAN5Q9Y2L8 839 aa13.57□□□□□ -0.24
VAMP1-203ENST00000400911 FAM221AA4D161 298 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 PINLYPA6NC86 204 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 GOLGA8MH3BSY2 632 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 SLC16A5O15375 505 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 KLK8O60259 260 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 FGGP02679 453 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 TUBB4AP04350 444 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 RNH1P13489 461 aaKnown RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 KLK2P20151 261 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 MAGEA6P43360 314 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 RGS4P49798 205 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 CLCN2P51788 898 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 GPS1Q13098 491 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 PAOXQ6QHF9 649 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 PAQR3Q6TCH7 311 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 C16orf47Q6ZP98 133 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 KIAA0408Q6ZU52 694 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 TBC1D19Q8N5T2 526 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 CHDHQ8NE62 594 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 ARMC2Q8NEN0 867 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 SPNS1Q9H2V7 528 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 LIME1Q9H400 295 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 KLHL31Q9H511 634 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 SLC24A3Q9HC58 644 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 PNO1Q9NRX1 252 aaKnown RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 DNAJB12Q9NXW2 375 aaKnown RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 ZFP69BQ9UJL9 534 aa13.56□□□□□ -0.24
VAMP1-203ENST00000400911 ZNF223Q9UK11 482 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-203ENST00000400911 ERVK-11Q9UQG0 969 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms