RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CCL27Q9Y4X3 112 aa7.14□□□□□ -1.27
USP16-204ENST00000399976 USP34Q70CQ2 3546 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 A0A0J9YVX5 310 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 TMEM120BA0PK00 339 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SUPT7LO94864 414 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 TIAF1O95411 115 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 PRR35P0CG20 571 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 VARSP26640 1264 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 GDF5P43026 501 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 MAD2L1Q13257 205 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 KCNAB1Q14722 419 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SLC9A5Q14940 896 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 CEBPEQ15744 281 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 TTMPQ5BVD1 217 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 CFAP157Q5JU67 520 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SNAP47Q5SQN1 464 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 LETMD1Q6P1Q0 360 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 TAX1BP1Q86VP1 789 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 NUDT13Q86X67 352 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 NUDCD3Q8IVD9 361 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SCUBE1Q8IWY4 988 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 ZNF740Q8NDX6 193 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 HUS1BQ8NHY5 278 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 CT55Q8WUE5 264 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SPNS1Q9H2V7 528 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 PRORYQ9H606 182 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 ZNF446Q9NWS9 450 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SLC17A7Q9P2U7 560 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 KLHL3Q9UH77 587 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 NDOR1Q9UHB4 597 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 GPN3Q9UHW5 284 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 MRPS33Q9Y291 106 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 SPACA6W5XKT8 324 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 DMDP11532 3685 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 IGKV3D-11A0A0A0MRZ8 115 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 TEX51A0A1B0GUA7 166 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 FAM149AA5PLN7 773 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 NCF1BA6NI72 391 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 NCF1CA8MVU1 366 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 MAGEB17A8MXT2 336 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 GOLGA8RI6L899 631 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 AZIN1O14977 448 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 B3GALT2O43825 422 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 PRMT3O60678 531 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 KLF7O75840 302 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 CEACAM4O75871 244 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 KLHL18O94889 574 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SIX3O95343 332 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 TOP3BO95985 862 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 RNH1P13489 461 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 NCF1P14598 390 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 ZNF28P17035 718 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 ABCE1P61221 599 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 MAGOHP61326 146 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 C18orf21Q32NC0 220 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 UGT3A2Q3SY77 523 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 OGFOD2Q6N063 350 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 JMJD6Q6NYC1 403 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 C16orf46Q6P387 395 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 ZC3H7AQ8IWR0 971 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 STARD8Q92502 1023 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 CLIP3Q96DZ5 547 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 PHF21BQ96EK2 531 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SPSB2Q99619 263 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 NRTNQ99748 197 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 ACAT2Q9BWD1 397 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 REXO4Q9GZR2 422 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 AICDAQ9GZX7 198 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SYNPO2LQ9H987 977 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 SLC22A11Q9NSA0 550 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 TAS2R7Q9NYW3 318 aa7.13□□□□□ -1.27
USP16-204ENST00000399976 C19orf25Q9UFG5 118 aaPredicted RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 FARSAQ9Y285 508 aaKnown RBP7.13□□□□□ -1.27
USP16-204ENST00000399976 KRT87PA6NCN2 255 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 HCRTR1O43613 425 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 ULK1O75385 1050 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 SFTPCP11686 197 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 DRD2P14416 443 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 HIST1H1TP22492 207 aaPredicted RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 MPSTP25325 297 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 ATP5A1P25705 553 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 MAPK1P28482 360 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 HNRNPH1P31943 449 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 BSGP35613 385 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 RPL3P39023 403 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 HNRNPFP52597 415 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 RHDQ02161 417 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 TLE3Q04726 772 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 TBL3Q12788 808 aaKnown RBP7.12□□□□□ -1.27
USP16-204ENST00000399976 SERTAD2Q14140 314 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 RBBP7Q16576 425 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 NKG7Q16617 165 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 TOR1AIP1Q5JTV8 583 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 OR4C11Q6IEV9 310 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 CUZD1Q86UP6 607 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 CA13Q8N1Q1 262 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 GALNT6Q8NCL4 622 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 OR52B6Q8NGF0 335 aa7.12□□□□□ -1.27
USP16-204ENST00000399976 TANKQ92844 425 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms