RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 SLC14A1Q13336 389 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 CCDC58Q4VC31 144 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 CAPN13Q6MZZ7 669 aaPredicted RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 ZNF544Q6NX49 715 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 MACC1Q6ZN28 852 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 MSRB3Q8IXL7 192 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 FAM217AQ8IXS0 508 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 TTC29Q8NA56 475 aaPredicted RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 NETO1Q8TDF5 533 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 CHAC2Q8WUX2 184 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 GTF2H4Q92759 462 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 PDLIM5Q96HC4 596 aaKnown RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 CEP295NLQ96MC4 621 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 DEPDC7Q96QD5 511 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 ZBTB18Q99592 522 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 NUAK2Q9H093 628 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 ELOVL6Q9H5J4 265 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 ADPRHL2Q9NX46 363 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 QPCTLQ9NXS2 382 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 TRBV23OR9-2A0A075B6M9 112 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 IFRD1O00458 451 aaPredicted RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 KMOO15229 486 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 RGS14O43566 566 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 SOCS5O75159 536 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 CLDN9O95484 217 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 PGRP06401 933 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 PRKCAP17252 672 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 RPS3P23396 243 aaKnown RBP eCLIP10.88□□□□□ -0.672e-8■■■■□ 22.6
RCC1-204ENST00000398958 TFF2Q03403 129 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 KEAP1Q14145 624 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 MAD2L1BPQ15013 274 aaPredicted RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 ZFP69Q49AA0 526 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 PRSS36Q5K4E3 855 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 COL13A1Q5TAT6 717 aaPredicted RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 CPZQ66K79 652 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 SHQ1Q6PI26 577 aaKnown RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 CEP68Q76N32 757 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 GPR149Q86SP6 731 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 ZDHHC21Q8IVQ6 265 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 RNF31Q96EP0 1072 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 LMLNQ96KR4 655 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 SNX18Q96RF0 628 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 CDADC1Q9BWV3 514 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 TMEM45AQ9NWC5 275 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 FBXL12Q9NXK8 326 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 SNX6Q9UNH7 406 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 RNF6Q9Y252 685 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 PCDHGB6Q9Y5F9 930 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 PCYT1BQ9Y5K3 369 aaPredicted RBP10.88□□□□□ -0.67
RCC1-204ENST00000398958 TRPM6Q9BX84 2022 aa10.88□□□□□ -0.67
RCC1-204ENST00000398958 CENPXA8MT69 81 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 SAP18O00422 153 aaKnown RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 DSCR3O14972 297 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 TSPAN6O43657 245 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 RECQL5O94762 991 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 DIRAS1O95057 198 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 PCDH8O95206 1070 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 DNTTP04053 509 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 ELFN1P0C7U0 828 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 ATP1B2P14415 290 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 CTSKP43235 329 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 ARHGDIAP52565 204 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 MEF2AQ02078 507 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 PDE12Q6L8Q7 609 aaKnown RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 PARS2Q7L3T8 475 aaKnown RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 GPR156Q8NFN8 814 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 JPH3Q8WXH2 748 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 PYURFQ96I23 114 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 TMEM246Q9BRR3 403 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 RETREG1Q9H6L5 497 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 MAGIXQ9H6Y5 334 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 RNF167Q9H6Y7 350 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 KCTD5Q9NXV2 234 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 EHD3Q9NZN3 535 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 DEC1Q9P2X7 70 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 HS3ST2Q9Y278 367 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 CA5BQ9Y2D0 317 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 WBP11Q9Y2W2 641 aaKnown RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 HSPE1-MOB4S4R3N1 261 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 MN1Q10571 1320 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 AP3D1O14617 1153 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 RETP07949 1114 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 HIST1H2AGP0C0S8 130 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 OR56A5P0C7T3 313 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 HIST1H2ADP20671 130 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 AOAHP28039 575 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 PRKCDQ05655 676 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 CHIT1Q13231 466 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 KIAA0040Q15053 153 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 TTLL9Q3SXZ7 439 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 SOWAHCQ53LP3 525 aaPredicted RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 OR4F3Q6IEY1 312 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
RCC1-204ENST00000398958 TRAPPC5Q8IUR0 188 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 GALNT12Q8IXK2 581 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 FAM20CQ8IXL6 584 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 CPXM2Q8N436 756 aa10.87□□□□□ -0.67
RCC1-204ENST00000398958 HIST1H2AHQ96KK5 128 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms