RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 MAGEA2P43356 314 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 RGRP47804 291 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 HYAL1Q12794 435 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 STK11Q15831 433 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 PTCHD3Q3KNS1 767 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 TOR1AIP1Q5JTV8 583 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC35F1Q5T1Q4 408 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ADGRF1Q5T601 910 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 PLEKHM3Q6ZWE6 761 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 RNF130Q86XS8 419 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 APCDD1Q8J025 514 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 DNAJA4Q8WW22 397 aaPredicted RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ASIC4Q96FT7 647 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 COL21A1Q96P44 957 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 TRAF4Q9BUZ4 470 aaPredicted RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 NT5MQ9NPB1 228 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 OLA1Q9NTK5 396 aaKnown RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 KIF17Q9P2E2 1029 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF225Q9UK10 706 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ABCG2Q9UNQ0 655 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 CRYL1Q9Y2S2 319 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 C2orf16Q68DN1 1984 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 CLCA1A8K7I4 914 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 NEDD8-MDP1E9PL57 170 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 CCL22O00626 93 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 VIPP01282 170 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 HLA-DQB2P05538 268 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 RPS17P08708 135 aaKnown RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 STSP08842 583 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 TNNI3P19429 210 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 FPR1P21462 350 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 CPN2P22792 545 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 DNAJA1P31689 397 aaKnown RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 CTSOP43234 321 aaPredicted RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 KIR2DL3P43628 341 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC11A2P49281 568 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 AIF1P55008 147 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 OLR1P78380 273 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 HOXC5Q00444 222 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 NPRL3Q12980 569 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF267Q14586 743 aaPredicted RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 GPR19Q15760 415 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 RBBP7Q16576 425 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZBTB37Q5TC79 503 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF549Q6P9A3 640 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 DNAJC22Q8N4W6 341 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 LILRB1Q8NHL6 650 aaPredicted RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 C1orf74Q96LT6 269 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 TM6SF2Q9BZW4 377 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 MTG2Q9H4K7 406 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 TFB2MQ9H5Q4 396 aaKnown RBP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 AMBNQ9NP70 447 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 ING3Q9NXR8 418 aa9.76□□□□□ -0.85
HMGCLL1-205ENST00000398661 BDP1A6H8Y1 2624 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SMLR1H3BR10 107 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 TSPAN4O14817 238 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 RAMP2O60895 175 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 TSC22D2O75157 780 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC22A5O76082 557 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 ALAS2P22557 587 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 STK19P49842 368 aaPredicted RBP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 B2MP61769 119 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 CYP4F2P78329 520 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 TIAL1Q01085 375 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 DSC2Q02487 901 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 KIAA0040Q15053 153 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 RUNDC3AQ59EK9 446 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 RNF219Q5W0B1 726 aaPredicted RBP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 RANBP10Q6VN20 620 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 GCNT7Q6ZNI0 430 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 Q6ZSR9 355 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 CDH24Q86UP0 819 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 LAX1Q8IWV1 398 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 MSRB3Q8IXL7 192 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 PHACTR4Q8IZ21 702 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 ATG16L2Q8NAA4 619 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 NLGN4YQ8NFZ3 816 aaPredicted RBP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 OR6P1Q8NGX9 317 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC13A3Q8WWT9 602 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 FGF13Q92913 245 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 MSANTD3Q96H12 275 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 MRGPRX2Q96LB1 330 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 MAGEB10Q96LZ2 347 aaPredicted RBP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SPATA9Q9BWV2 254 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC25A37Q9NYZ2 338 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 MARCH4Q9P2E8 410 aaPredicted RBP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 TNFRSF10DQ9UBN6 386 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SPASTQ9UBP0 616 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 PCDHGA6Q9Y5G7 932 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 ALG5Q9Y673 324 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 MTCL1Q9Y4B5 1905 aaKnown RBP9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 DOCK8Q8NF50 2099 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 FAM220BPB1ANY3 271 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 E9PQ18 207 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 KERAO60938 352 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 PDE9AO76083 593 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 WDR47O94967 919 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC2A3P11169 496 aa9.75□□□□□ -0.85
HMGCLL1-205ENST00000398661 CD70P32970 193 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms