RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 LCP1P13796 627 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 OGNP20774 298 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PIK3R1P27986 724 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 MAGEA3P43357 314 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 IDH3AP50213 366 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NDST1P52848 882 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 CXCR4P61073 352 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PTSQ03393 145 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ATP1A4Q13733 1029 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SFRP5Q5T4F7 317 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 RNLSQ5VYX0 342 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FBXL19Q6PCT2 694 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 RBM44Q6ZP01 1051 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 DHFR2Q86XF0 187 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF561Q8N587 486 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TCEAL4Q96EI5 215 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 GPR87Q9BY21 358 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 B3GNT5Q9BYG0 378 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 MAN2C1Q9NTJ4 1040 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SPATA6Q9NWH7 488 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FZD10Q9ULW2 581 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 DCHS1Q96JQ0 3298 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 DCXO43602 365 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 BUD23O43709 281 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 MMP3P08254 477 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NDUFB7P17568 137 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ADH6P28332 368 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 RORAP35398 523 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TGFBR2P37173 567 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 CASP3P42574 277 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 AQP4P55087 323 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NME5P56597 212 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ESRRGP62508 458 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 MEF2AQ02078 507 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 GRB7Q14451 532 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 DUSP28Q4G0W2 176 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SH3PXD2AQ5TCZ1 1133 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 LPCAT4Q643R3 524 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 STEAP4Q687X5 459 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PGAP1Q75T13 922 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PRSS42Q7Z5A4 293 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ARMC8Q8IUR7 673 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 C10orf107Q8IVU9 208 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PQLC1Q8N2U9 271 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM102Q8N9M5 508 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TDRD5Q8NAT2 981 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NUDT10Q8NFP7 164 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SNX19Q92543 992 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 C14orf79Q96F83 325 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SEMA3CQ99985 751 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TRIM56Q9BRZ2 755 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TPPP3Q9BW30 176 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TOLLIPQ9H0E2 274 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FZD8Q9H461 694 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SACM1LQ9NTJ5 587 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SDHAF2Q9NX18 166 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SIX4Q9UIU6 781 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 A0A0A6YYH2 397 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM149AA5PLN7 773 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TRABD2BA6NFA1 517 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 A6NJ64 397 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 METTL15A6NJ78 407 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 GABRR3A8MPY1 467 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ITM2AO43736 263 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TSPAN2O60636 221 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 METTL18O95568 372 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 LDOC1O95751 146 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 HNRNPA1P09651 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FBXO45P0C2W1 286 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 RHOQP17081 205 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PTPRAP18433 802 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NR4A1P22736 598 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PROZP22891 400 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 EPHA5P54756 1037 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 FOLH1Q04609 750 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 RIN1Q13671 783 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 LARS2Q15031 903 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 CHRFAM7AQ494W8 412 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SPANXN3Q5MJ09 141 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 SPATA46Q5T0L3 261 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ARMC12Q5T9G4 340 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 EEF1DP3Q658K8 133 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 LHFPL4Q7Z7J7 247 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 KYQ8NBH2 561 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 CHST14Q8NCH0 376 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PAPD5Q8NDF8 572 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ADPRHL1Q8NDY3 354 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 OR6X1Q8NH79 312 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 NXPE2Q96DL1 559 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ILKAPQ9H0C8 392 aaPredicted RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 VCX2Q9H322 139 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 TLR8Q9NR97 1041 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 ZCCHC3Q9NUD5 404 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 PNPOQ9NVS9 261 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 IMPAD1Q9NX62 359 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 BFARQ9NZS9 450 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 LIPT1Q9Y234 373 aa6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 MYO18AQ92614 2054 aaKnown RBP6.35□□□□□ -1.39
TM9SF4-202ENST00000398022 DOCK5Q9H7D0 1870 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms