RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TAP2Q03519 686 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 BIKQ13323 160 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TTLL10Q6ZVT0 673 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 EIF3MQ7L2H7 374 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 COMMD6Q7Z4G1 85 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 EID2Q8N6I1 236 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 UBTD2Q8WUN7 234 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ATOH1Q92858 354 aaPredicted RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CLPTM1LQ96KA5 538 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 PTCHD1Q96NR3 888 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TEX101Q9BY14 249 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 C1orf21Q9H246 121 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 HCN3Q9P1Z3 774 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 A8MUA0 341 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 HEXBP07686 556 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MAGEA12P43365 314 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 XKP51811 444 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 ADGRE1Q14246 886 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 EIPR1Q53HC9 387 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 PLEKHM3Q6ZWE6 761 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 GATAD2AQ86YP4 633 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF786Q8N393 782 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 CADM1Q9BY67 442 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 EXO5Q9H790 373 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 GLOD5A6NK44 160 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 CLOCKO15516 846 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 KRT36O76013 467 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SEMA3DO95025 777 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SIGLEC14Q08ET2 396 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 ABHD18Q0P651 414 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SPATS1Q496A3 300 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 VRK3Q8IV63 474 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MICU2Q8IYU8 434 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OFCC1Q8IZS5 231 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OR4K1Q8NGD4 311 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OR52L1Q8NGH7 329 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OR8K5Q8NH50 307 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OR5AK3PQ8NH89 298 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MTERF3Q96E29 417 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MRPL48Q96GC5 212 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 REXO5Q96IC2 774 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 C1QTNF1Q9BXJ1 281 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 RIBC2Q9H4K1 309 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 EHD1Q9H4M9 534 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TM7SF3Q9NS93 570 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TAS2R9Q9NYW1 312 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SRPK3Q9UPE1 567 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 ERVK-11Q9UQG0 969 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 PADI2Q9Y2J8 665 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 PTGDR2Q9Y5Y4 395 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 NUMA1Q14980 2115 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 ANHXE9PGG2 379 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 RTCAO00442 366 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OR10H3O60404 316 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 REM1O75628 298 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 C6orf47O95873 294 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 C8orf89P0DMQ9 161 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 AHRP35869 848 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MAZP56270 477 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 IL5RAQ01344 420 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TRAP1Q12931 704 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 RFX4Q33E94 735 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TNFAIP8L3Q5GJ75 292 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 DEPDC1Q5TB30 811 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 GALNT18Q6P9A2 607 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 RANBP3LQ86VV4 465 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 PIK3C3Q8NEB9 887 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MZB1Q8WU39 189 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 RIT1Q92963 219 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 GAL3ST3Q96A11 431 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 RPF2Q9H7B2 306 aaKnown RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 DMRT3Q9NQL9 472 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TMEM45AQ9NWC5 275 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MAT2BQ9NZL9 334 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 IFT80Q9P2H3 777 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SLC9B1P1A6NJY1 282 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 CAPN14A8MX76 684 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 E2F3O00716 465 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SERPINI2O75830 405 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SOX30O94993 753 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 LDOC1O95751 146 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 FABP3P05413 133 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OCM2P0CE71 109 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OCMP0CE72 109 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 IL1RNP18510 177 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 CNR2P34972 360 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 UGT2B15P54855 530 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 SCARB2Q14108 478 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TTC23Q5W5X9 447 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 KCT2Q8NC54 265 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 OR2L5Q8NG80 312 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 MAGEE2Q8TD90 523 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-204ENST00000397606 GORASP1Q9BQQ3 440 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 TMEM79Q9BSE2 394 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 ZDHHC5Q9C0B5 715 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 PRODH2Q9UF12 536 aa7.93□□□□□ -1.14
PTPRD-204ENST00000397606 GREM1O60565 184 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 SRPX2O60687 465 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms