RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 ACSL4O60488 711 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 PTHP01270 115 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 STSP08842 583 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 CXCL8P10145 99 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 MAPK1P28482 360 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 HOXA9P31269 272 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 EVI2BP34910 448 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 GRK5P34947 590 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ADRA1BP35368 520 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 RPS19P39019 145 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 SUOXP51687 545 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 POLR2GP62487 172 aaKnown RBP eCLIP9.53□□□□□ -0.88
APTX-207ENST00000397172 YBX1P67809 324 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 UBE3AQ05086 875 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 NR6A1Q15406 480 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 KLHL22Q53GT1 634 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 UBXN11Q5T124 520 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 LAIR1Q6GTX8 287 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 KIAA1324Q6UXG2 1013 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
APTX-207ENST00000397172 GCNT7Q6ZNI0 430 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 FAM92BQ6ZTR7 304 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 KRT74Q7RTS7 529 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 MRPL10Q7Z7H8 261 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 CALHM3Q86XJ0 350 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 DEFB106AQ8N104 65 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SLC34A3Q8N130 599 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 NKAPQ8N5F7 415 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 C12orf29Q8N999 325 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ATAD1Q8NBU5 361 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SMG7Q92540 1137 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 PABPC5Q96DU9 382 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 ITCHQ96J02 903 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ZNF382Q96SR6 550 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 P2RY13Q9BPV8 354 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 MND1Q9BWT6 205 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 TAPBPLQ9BX59 468 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 RC3H2Q9HBD1 1191 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 ABCB9Q9NP78 766 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SEMA4BQ9NPR2 832 aaPredicted RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 VAPAQ9P0L0 249 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SH3BP4Q9P0V3 963 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 GSTK1Q9Y2Q3 226 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 MYO18AQ92614 2054 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 A0A0B4J293 547 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 GLYATL1P3A0A0U1RQE8 302 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 A0A0U1RQS6 177 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 A0A1W2PQL4 384 aaPredicted RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 F8W036 122 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 M0QYT0 321 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 OR4F21O95013 312 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 EDN1P05305 212 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 NFICP08651 508 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ODC1P11926 461 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SLC2A4P14672 509 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 RORAP35398 523 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SLC19A1P41440 591 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ATXN1P54253 815 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 EPHA4P54764 986 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 EXOSC2Q13868 293 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 SOWAHAQ2M3V2 549 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ANKRD34AQ69YU3 496 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 PLAG1Q6DJT9 500 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 OR4F3Q6IEY1 312 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 RASSF6Q6ZTQ3 369 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 MSANTD1Q6ZTZ1 278 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 SERPINA11Q86U17 422 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ATCAYQ86WG3 371 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 Q8N402 240 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ATPAF2Q8N5M1 289 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 NLGN4YQ8NFZ3 816 aaPredicted RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 OR52H1Q8NGJ2 320 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 OR52K2Q8NGK3 314 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 CLHC1Q8NHS4 586 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 CREB3L4Q8TEY5 395 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 BCL7CQ8WUZ0 217 aaPredicted RBP9.53□□□□□ -0.88
APTX-207ENST00000397172 RNF31Q96EP0 1072 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 PGLYRP2Q96PD5 576 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 OR2M2Q96R28 347 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 FERD3LQ96RJ6 166 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 KCNA7Q96RP8 456 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ATOH8Q96SQ7 321 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 KCNH6Q9H252 994 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 TMLHEQ9NVH6 421 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 EVA1BQ9NVM1 165 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 UBP1Q9NZI7 540 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 COPZ2Q9P299 210 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 ZNF222Q9UK12 451 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 LRFN2Q9ULH4 789 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 COPS3Q9UNS2 423 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 TTC3P53804 2025 aa9.53□□□□□ -0.88
APTX-207ENST00000397172 FNDC1Q4ZHG4 1894 aaPredicted RBP9.52□□□□□ -0.88
APTX-207ENST00000397172 RPS10-NUDT3A0A1W2PQS6 291 aa9.52□□□□□ -0.89
APTX-207ENST00000397172 A8MUA0 341 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms