RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 GRIA2P42262 883 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 TMEM44Q2T9K0 475 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 FIGNQ5HY92 759 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 PGAM4Q8N0Y7 254 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 DAZAP1Q96EP5 407 aaKnown RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 TRMOQ9BU70 441 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 IL36AQ9UHA7 158 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 RNF215Q9Y6U7 377 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 ZNF860A6NHJ4 632 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 A6NL46 340 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 MATN2O00339 956 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 HCRTR2O43614 444 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 ARL6IP5O75915 188 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 SOX30O94993 753 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 HTR2AP28223 471 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 TUBA4AP68366 448 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 STK11Q15831 433 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 HSD17B12Q53GQ0 312 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 C9orf57Q5W0N0 161 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 MBOAT1Q6ZNC8 495 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 SLC13A3Q8WWT9 602 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 RDH12Q96NR8 316 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 CADM1Q9BY67 442 aaKnown RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 MAFBQ9Y5Q3 323 aaPredicted RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 EI24O14681 340 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 SCO1O75880 301 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 MATN1P21941 496 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 NFE2L1Q14494 772 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 SEC23AQ15436 765 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 FXNQ16595 210 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 PRSS55Q6UWB4 352 aaPredicted RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 GPR142Q7Z601 462 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 TXN2Q99757 166 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 DPCDQ9BVM2 203 aaPredicted RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 SUCNR1Q9BXA5 334 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 MGAT4CQ9UBM8 478 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 C19orf25Q9UFG5 118 aaPredicted RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 COQ9O75208 318 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 ALDH3B2P48448 385 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 DDR1Q08345 913 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 HNRNPA0Q13151 305 aaKnown RBP11.95□□□□□ -0.5
SMU1-201ENST00000397149 SLC10A1Q14973 349 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 CEACAM20Q6UY09 585 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 WDR20Q8TBZ3 569 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 FBXL8Q96CD0 374 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 PITX2Q99697 317 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 UBQLN2Q9UHD9 624 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 PLLPQ9Y342 182 aa11.95□□□□□ -0.5
SMU1-201ENST00000397149 TRBC2A0A5B9 178 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 CRHR1P34998 444 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 THBS2P35442 1172 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 GGT5P36269 586 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 GRIK5Q16478 980 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SLC26A9Q7LBE3 791 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 NUDT13Q86X67 352 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 STON2Q8WXE9 905 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 PSMG2Q969U7 264 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SLC35C1Q96A29 364 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 FTSJ1Q9UET6 329 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 DHDHQ9UQ10 334 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 TMEM98Q9Y2Y6 226 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 ADGRL2O95490 1459 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 GPIP06744 558 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 C6P13671 934 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 AQP2P41181 271 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 P2RX1P51575 399 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 ERVK-16P61578 105 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 EXOC3L2Q2M3D2 409 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 RSC1A1Q92681 617 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 RTCAO00442 366 aaKnown RBP11.94□□□□□ -0.5
SMU1-201ENST00000397149 RFC2P35250 354 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 MAGEB1P43366 347 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SLC15A1P46059 708 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 OR4F3Q6IEY1 312 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 IL17RCQ8NAC3 791 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 CAMKVQ8NCB2 501 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 C3orf58Q8NDZ4 430 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 FANK1Q8TC84 345 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 CAMK1GQ96NX5 476 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SLC6A16Q9GZN6 736 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 EBF3Q9H4W6 596 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SRA1Q9HD15 236 aaKnown RBP11.94□□□□□ -0.5
SMU1-201ENST00000397149 AK4P27144 223 aaPredicted RBP11.94□□□□□ -0.5
SMU1-201ENST00000397149 ADH6P28332 368 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMU1-201ENST00000397149 PRAMEF14Q5SWL7 426 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 PRAMEF13Q5VWM6 474 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 SMIM15Q7Z3B0 74 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 GLIS3Q8NEA6 775 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 NPRL2Q8WTW4 380 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 AURKBQ96GD4 344 aaPredicted RBP11.94□□□□□ -0.5
SMU1-201ENST00000397149 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
SMU1-201ENST00000397149 STRADBQ9C0K7 418 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms