RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FTSJ1Q9UET6 329 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 KLK4Q9Y5K2 254 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 A0A0B4J293 547 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 ELNP15502 786 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 ZNF8P17098 575 aaPredicted RBP13.36□□□□□ -0.27
NUP98-204ENST00000397004 C21orf58P58505 322 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 SLAMF1Q13291 335 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 MED22Q15528 200 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 LAX1Q8IWV1 398 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 CBARPQ8N350 705 aaPredicted RBP13.36□□□□□ -0.27
NUP98-204ENST00000397004 DCAF4L2Q8NA75 395 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP98-204ENST00000397004 GPR151Q8TDV0 419 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 SCAMP4Q969E2 229 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 RNF31Q96EP0 1072 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 LSM2Q9Y333 95 aaKnown RBP13.36□□□□□ -0.27
NUP98-204ENST00000397004 ARHGEF33A8MVX0 844 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 CBSLP0DN79 551 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 CBSP35520 551 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 SPIBQ01892 262 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 XKR6Q5GH73 641 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 OR5AK3PQ8NH89 298 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 NFKBIDQ8NI38 313 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 COQ8BQ96D53 544 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 NUAK2Q9H093 628 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 BNIP3LO60238 219 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 CHMP24386 653 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 SSTR4P31391 388 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 CSNK2BP67870 215 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 SMARCB1Q12824 385 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 ABRQ12979 859 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP98-204ENST00000397004 DUSP7Q16829 419 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 Q6ZNB5 142 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 STX19Q8N4C7 294 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 DBF4BQ8NFT6 615 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 DMRTB1Q96MA1 342 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 CDCA4Q9BXL8 241 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 C1GALT1Q9NS00 363 aa13.36□□□□□ -0.27
NUP98-204ENST00000397004 NPC1O15118 1278 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CBLP22681 906 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CNR2P34972 360 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CRATP43155 626 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 OR2B6P58173 313 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 LMAN2Q12907 356 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CDKL4Q5MAI5 379 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 LYSMD1Q96S90 227 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 FAM129BQ96TA1 746 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 TCF25Q9BQ70 676 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 ZNF334Q9HCZ1 680 aaPredicted RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 SAP18O00422 153 aaKnown RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 SNX4O95219 450 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 IRF8Q02556 426 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 PRKCZQ05513 592 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CDH18Q13634 790 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 RSBN1Q5VWQ0 802 aaPredicted RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 ABI3BPQ7Z7G0 1075 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 NLRP8Q86W28 1048 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 CHTF18Q8WVB6 975 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 SCRN2Q96FV2 425 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 RNF170Q96K19 258 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 HBQ1P09105 142 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 ANXA4P09525 319 aaPredicted RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 S100A1P23297 94 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 MAPK1P28482 360 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 XCR1P46094 333 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 LIM2P55344 173 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 LSM11P83369 360 aaKnown RBP eCLIP13.35□□□□□ -0.274e-18■■■□□ 16.4
NUP98-204ENST00000397004 ZNF783Q6ZMS7 281 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 THOC6Q86W42 341 aaKnown RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 DENND6BQ8NEG7 585 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 HUS1BQ8NHY5 278 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 IL4I1Q96RQ9 567 aa13.35□□□□□ -0.27
NUP98-204ENST00000397004 CDK5RAP1Q96SZ6 601 aaKnown RBP13.35□□□□□ -0.27
NUP98-204ENST00000397004 CAPN5O15484 640 aaPredicted RBP13.34□□□□□ -0.27
NUP98-204ENST00000397004 AZGP1P25311 298 aaKnown RBP13.34□□□□□ -0.27
NUP98-204ENST00000397004 CRYBB2P43320 205 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 CSNK1DP48730 415 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 MADCAM1Q13477 382 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 SLC5A12Q1EHB4 618 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 CPTPQ5TA50 214 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 POP5Q969H6 163 aaKnown RBP13.34□□□□□ -0.27
NUP98-204ENST00000397004 ECHDC3Q96DC8 303 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 MMP28Q9H239 520 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 BTNL2Q9UIR0 455 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 ZAR1LA6NP61 321 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 ENTPD6O75354 484 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 C6orf47O95873 294 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 S100A5P33763 92 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 SEC23BQ15437 767 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 SLX4IPQ5VYV7 408 aa13.34□□□□□ -0.27
NUP98-204ENST00000397004 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
NUP98-204ENST00000397004 ARMCX6Q7L4S7 300 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms