RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PIGKQ92643 395 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 ZNF764Q96H86 408 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-204ENST00000396548 KCNH6Q9H252 994 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 REEP4Q9H6H4 257 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 NANOGQ9H9S0 305 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 IL21RQ9HBE5 538 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 MAPRE3Q9UPY8 281 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 WBP11Q9Y2W2 641 aaKnown RBP12.11□□□□□ -0.47
TRIM39-204ENST00000396548 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 LOC102723532A0A0G2JNH3 316 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 AKAP10O43572 662 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 HCRTR1O43613 425 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 PROS1P07225 676 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 TSFMP43897 325 aaKnown RBP12.11□□□□□ -0.47
TRIM39-204ENST00000396548 GABRA4P48169 554 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 TAS2R50P59544 299 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 MS4A2Q01362 244 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 MC1RQ01726 317 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 FXNQ16595 210 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 MAPKAPK3Q16644 382 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 SPATS1Q496A3 300 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 OR4F3Q6IEY1 312 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 GPR155Q7Z3F1 870 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 DHDDSQ86SQ9 333 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 OR4N4Q8N0Y3 316 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 TBC1D19Q8N5T2 526 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 DNAJB8Q8NHS0 232 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 STARD8Q92502 1023 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 MTERF3Q96E29 417 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 IL1RL2Q9HB29 575 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 VAPAQ9P0L0 249 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 EPHA6Q9UF33 1036 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 GMEB1Q9Y692 573 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 GNG14A0A1W2PPG7 69 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 TRIM38O00635 465 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ENTPD5O75356 428 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ATP6V1G2O95670 118 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 STATHP02808 62 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ST6GAL1P15907 406 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 S100A3P33764 101 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CDKN2CP42773 168 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ARRB1P49407 418 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 SLC7A2P52569 658 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CFHR1Q03591 330 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CCNIQ14094 377 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 C6orf10Q5SRN2 563 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ANKRD26P1Q6NSI1 321 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ASPGQ86U10 573 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 MMP21Q8N119 569 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 INPP5KQ9BT40 448 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CHRNA10Q9GZZ6 450 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 FAM60AQ9NP50 221 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ENAMQ9NRM1 1142 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 GMPR2Q9P2T1 348 aaKnown RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 A0A096LPI6 279 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 IL3P08700 152 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 GLB1P16278 677 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 SELPLGQ14242 412 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 PGS1Q32NB8 556 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 RUNDC3AQ59EK9 446 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 TOR1AIP1Q5JTV8 583 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 PAGE2Q7Z2X7 111 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 NUDT13Q86X67 352 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ZCCHC7Q8N3Z6 543 aaKnown RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 DNAJC22Q8N4W6 341 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CEP76Q8TAP6 659 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CCDC115Q96NT0 180 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 SLC38A3Q99624 504 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 CGREF1Q99674 301 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ZFYVE21Q9BQ24 234 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 TRIM8Q9BZR9 551 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 TRIM4Q9C037 500 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 BHLHE41Q9C0J9 482 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 FAM120CQ9NX05 1096 aaKnown RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 SEMA5BQ9P283 1151 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 LRIT1Q9P2V4 623 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 SUCOQ9UBS9 1254 aaKnown RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 ASB4Q9Y574 426 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 KCNH1O95259 989 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 HSD17B1P14061 328 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 KIR3DL1P43629 444 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 GPR3P46089 330 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 RABL3Q5HYI8 236 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 DGLUCYQ7Z3D6 616 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 KCT2Q8NC54 265 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 OR8J3Q8NGG0 315 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 UTP15Q8TED0 518 aaKnown RBP12.1□□□□□ -0.47
TRIM39-204ENST00000396548 MIEF2Q96C03 454 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 C17orf62Q9BQA9 187 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 KLHL25Q9H0H3 589 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 BTNL2Q9UIR0 455 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 PCDHB14Q9Y5E9 798 aa12.1□□□□□ -0.47
TRIM39-204ENST00000396548 PI4KAP42356 2102 aa12.09□□□□□ -0.47
TRIM39-204ENST00000396548 IGHV1OR21-1A0A087WYE8 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms