RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ACTL8Q9H568 366 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 MID1IP1Q9NPA3 183 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 DMRT3Q9NQL9 472 aa18.21■□□□□ 0.51
HOXA9-202ENST00000396345 CFAP47Q6ZTR5 3102 aa18.21■□□□□ 0.5
HOXA9-202ENST00000396345 TMEM120BA0PK00 339 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 UBFD1O14562 309 aaKnown RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 ERI3O43414 337 aaKnown RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 GALR3O60755 368 aaPredicted RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 SH3BGRLO75368 114 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 SASH3O75995 380 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 ESRRBO95718 433 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 B3GALT4O96024 378 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 TGFB1P01137 390 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 CCR10P46092 362 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 NEK2P51955 445 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 RPS18P62269 152 aaKnown RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 RPS13P62277 151 aaKnown RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 TGM3Q08188 693 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 C10orf62Q5T681 223 aaPredicted RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 CHSY3Q70JA7 882 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 NUDCD3Q8IVD9 361 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 CDYL2Q8N8U2 506 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 AMER3Q8N944 861 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 ANKRD42Q8N9B4 389 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 OR2L5Q8NG80 312 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 METTL6Q8TCB7 284 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 AGAP11Q8TF27 550 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 FAR2Q96K12 515 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 CNDP1Q96KN2 507 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 ATP6V1G3Q96LB4 118 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 SLC29A3Q9BZD2 475 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 SLC26A1Q9H2B4 701 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 ELOVL6Q9H5J4 265 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 CPNE5Q9HCH3 593 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 TRPC4Q9UBN4 977 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 CTSFQ9UBX1 484 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 ZNF282Q9UDV7 671 aaPredicted RBP18.2■□□□□ 0.5
HOXA9-202ENST00000396345 TCFL5Q9UL49 500 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 SNX6Q9UNH7 406 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 PADI2Q9Y2J8 665 aa18.2■□□□□ 0.5
HOXA9-202ENST00000396345 WDR91A4D1P6 747 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 ZNF860A6NHJ4 632 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 ZNF891A8MT65 544 aaPredicted RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 MAGEB17A8MXT2 336 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 C4orf51C9J302 202 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 H3BQF6 201 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 FOXE1O00358 373 aaPredicted RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 BIRC5O15392 142 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 CNOT3O75175 753 aaKnown RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 RDH16O75452 317 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 ENO1P06733 434 aaKnown RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 DHRS4L1P0CG22 281 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 PTX3P26022 381 aaPredicted RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 HMOX2P30519 316 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 PLA2G16P53816 162 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 BTN3A2P78410 334 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 MAT1AQ00266 395 aaKnown RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 OCA2Q04671 838 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 NKG7Q16617 165 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 TMEM35AQ53FP2 167 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 SGO1Q5FBB7 561 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 DEPDC1Q5TB30 811 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 KHDRBS2Q5VWX1 349 aaKnown RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 TRIM40Q6P9F5 258 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 ABHD17CQ6PCB6 329 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 SRFBP1Q8NEF9 429 aaKnown RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 TRMOQ9BU70 441 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 OR51B5Q9H339 312 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 WDR54Q9H977 334 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 PSD3Q9NYI0 1048 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 CCDC88CQ9P219 2028 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 PTRH2Q9Y3E5 179 aaKnown RBP18.19■□□□□ 0.5
HOXA9-202ENST00000396345 MAP4K5Q9Y4K4 846 aa18.19■□□□□ 0.5
HOXA9-202ENST00000396345 PKD1L2Q7Z442 2459 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 DSPP15924 2871 aaKnown RBP18.18■□□□□ 0.5
HOXA9-202ENST00000396345 A0A088AWK7 358 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 A0A0G2JN53 185 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 ZZEF1O43149 2961 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 NPHS1O60500 1241 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 CREG1O75629 220 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 KLF7O75840 302 aaPredicted RBP18.18■□□□□ 0.5
HOXA9-202ENST00000396345 KRT6AP02538 564 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 KRT6BP04259 564 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 ZNF10P21506 573 aaPredicted RBP18.18■□□□□ 0.5
HOXA9-202ENST00000396345 KRT6CP48668 564 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 SLC18A1P54219 525 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 MC1RQ01726 317 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 VAC14Q08AM6 782 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 SYT16Q17RD7 645 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 TTMPQ5BVD1 217 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 HHATQ5VTY9 493 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 FAM69BQ5VUD6 431 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 ZCCHC23Q6ZST2 131 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 OR51Q1Q8NH59 317 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 PPP1R14CQ8TAE6 165 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 SELENOMQ8WWX9 145 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 KCNC2Q96PR1 638 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 PAIP2Q9BPZ3 127 aaKnown RBP18.18■□□□□ 0.5
HOXA9-202ENST00000396345 CENPKQ9BS16 269 aa18.18■□□□□ 0.5
HOXA9-202ENST00000396345 ACBD3Q9H3P7 528 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms