RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 KIR3DL1P43629 444 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 MTPNP58546 118 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 BIRC2Q13490 618 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 KIR2DS5Q14953 304 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 UGT8Q16880 541 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 MTX3Q5HYI7 312 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 ERMP1Q7Z2K6 904 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 OR4C6Q8NH72 309 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 FERD3LQ96RJ6 166 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 CPPED1Q9BRF8 314 aaPredicted RBP14.46□□□□□ -0.09
SCAF11-204ENST00000395454 RHBGQ9H310 441 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 CPNE7Q9UBL6 633 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.09
SCAF11-204ENST00000395454 PRAMEF33A0A0G2JMD5 474 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 A0A1W2PPV9 198 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 C4orf47A7E2U8 309 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 FOXD2O60548 495 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 MYO1DO94832 1006 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 VIPP01282 170 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 BMP2P12643 396 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 TIA1P31483 386 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SLC19A1P41440 591 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 TRPC1P48995 793 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 AQP4P55087 323 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 MAZP56270 477 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 WNT3P56703 355 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 OR4D2P58180 307 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 RPS13P62277 151 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 HHEXQ03014 270 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 CYP4F3Q08477 520 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 HIST2H2ACQ16777 129 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 HIST2H2AA3Q6FI13 130 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 ZCCHC8Q6NZY4 707 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 GPR180Q86V85 440 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 CALHM3Q86XJ0 350 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SPPL2CQ8IUH8 684 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 C1orf52Q8N6N3 182 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 ARL10Q8N8L6 244 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 OR4K1Q8NGD4 311 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SMPDL3AQ92484 453 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 IL17FQ96PD4 163 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SPNS1Q9H2V7 528 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 IKZF5Q9H5V7 419 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 RPF2Q9H7B2 306 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 KAT8Q9H7Z6 458 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 NT5DC2Q9H857 520 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 FAM120CQ9NX05 1096 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 ADGRE2Q9UHX3 823 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 HEBP2Q9Y5Z4 205 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 GVINP1Q7Z2Y8 2422 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SIGLEC6O43699 453 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 NOBOXO60393 691 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 GGT1P19440 569 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 PSMA4P25789 261 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 DDX39BQ13838 428 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 GPR155Q7Z3F1 870 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 VN1R5Q7Z5H4 357 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SLC9B2Q86UD5 537 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SLC35F3Q8IY50 421 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 ARL14Q8N4G2 192 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 DTWD1Q8N5C7 304 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 ANKFN1Q8N957 763 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 NR1H4Q96RI1 486 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 GORASP2Q9H8Y8 452 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SLC6A13Q9NSD5 602 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 BTBD3Q9Y2F9 522 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 TDRKHQ9Y2W6 561 aaKnown RBP14.45□□□□□ -0.1
SCAF11-204ENST00000395454 PCDHB14Q9Y5E9 798 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 PCDHGB2Q9Y5G2 931 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 COLEC10Q9Y6Z7 277 aa14.45□□□□□ -0.1
SCAF11-204ENST00000395454 SCAMP2O15127 329 aaKnown RBP14.44□□□□□ -0.1
SCAF11-204ENST00000395454 HNRNPRO43390 633 aaKnown RBP14.44□□□□□ -0.1
SCAF11-204ENST00000395454 PCNAP12004 261 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 MYF5P13349 255 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 ZNF26P17031 533 aaPredicted RBP14.44□□□□□ -0.1
SCAF11-204ENST00000395454 SERPINB1P30740 379 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 GRK6P43250 576 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 GZMMP51124 257 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 SLC14A1Q13336 389 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 BLMHQ13867 455 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 LRRC36Q1X8D7 754 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 INAVAQ3KP66 663 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 C14orf28Q4W4Y0 310 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 HMBOX1Q6NT76 420 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 OGFOD3Q6PK18 319 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 TMIGD1Q6UXZ0 262 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 TRPV3Q8NET8 790 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 GPR156Q8NFN8 814 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 TNIP2Q8NFZ5 429 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 COQ8BQ96D53 544 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 RAB11FIP5Q9BXF6 653 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 EBPLQ9BY08 206 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 BATF3Q9NR55 127 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 AGPAT4Q9NRZ5 378 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 POT1Q9NUX5 634 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 PLAGL1Q9UM63 463 aa14.44□□□□□ -0.1
SCAF11-204ENST00000395454 FLRT2O43155 660 aa14.43□□□□□ -0.1
SCAF11-204ENST00000395454 SEMA3DO95025 777 aa14.43□□□□□ -0.1
SCAF11-204ENST00000395454 PIM1P11309 404 aaPredicted RBP14.43□□□□□ -0.1
SCAF11-204ENST00000395454 CDH1P12830 882 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms