RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CMPK2Q5EBM0 449 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 MYO1HQ8N1T3 1032 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 SPC24Q8NBT2 197 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 NFAM1Q8NET5 270 aaPredicted RBP19.74■□□□□ 0.75
TRAF4-203ENST00000394925 OR4K1Q8NGD4 311 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 LILRB4Q8NHJ6 448 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 SNF8Q96H20 258 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 HIST1H2AHQ96KK5 128 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 SERPINB12Q96P63 405 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 HIST1H2AJQ99878 128 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 H2AFJQ9BTM1 129 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 SARGQ9BW04 601 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 RHBGQ9H310 441 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 XAB2Q9HCS7 855 aaKnown RBP19.74■□□□□ 0.75
TRAF4-203ENST00000394925 NECTIN3Q9NQS3 549 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 HOMER3Q9NSC5 361 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 IARS2Q9NSE4 1012 aaKnown RBP19.74■□□□□ 0.75
TRAF4-203ENST00000394925 MAD1L1Q9Y6D9 718 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 NAV3Q8IVL0 2385 aa19.74■□□□□ 0.75
TRAF4-203ENST00000394925 NIPBLQ6KC79 2804 aaeCLIP19.74■□□□□ 0.752e-8■■■□□ 17.1
TRAF4-203ENST00000394925 TCRBV16S1A1N1A0A5B0 115 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 TRBC2A0A5B9 178 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 USP27XA6NNY8 438 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 FOXO6A8MYZ6 492 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 SLC16A5O15375 505 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 CHRNB4P30926 498 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 HNF4AP41235 474 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 ART1P52961 327 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 GPR85P60893 370 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 RAB8AP61006 207 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 RGS1Q08116 209 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 CATSPEREQ5SY80 951 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 NIPAL1Q6NVV3 410 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 PAQR3Q6TCH7 311 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 ABHD13Q7L211 337 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 CYP4Z2PQ8N1L4 340 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 AGGF1Q8N302 714 aaeCLIP19.73■□□□□ 0.75
TRAF4-203ENST00000394925 TBC1D19Q8N5T2 526 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 C16orf52Q8NHV5 167 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 NT5CQ8TCD5 201 aa19.73■□□□□ 0.75
TRAF4-203ENST00000394925 UTP15Q8TED0 518 aaKnown RBP19.73■□□□□ 0.75
TRAF4-203ENST00000394925 TRBV11-1A0A0K0K1C0 115 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 PSMD12O00232 456 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-203ENST00000394925 CXCR5P32302 372 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 TFF3Q07654 80 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 HYAL2Q12891 473 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 KRTAP21-3Q3LHN1 58 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 DUPD1Q68J44 220 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 MDGA2Q7Z553 956 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 ARMC10Q8N2F6 343 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 RPRMLQ8N4K4 120 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 TMEM156Q8N614 296 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 MCUQ8NE86 351 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 OR52N2Q8NGI0 321 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 RND1Q92730 232 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 LINGO1Q96FE5 620 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 OR4K3Q96R72 315 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 FAM167BQ9BTA0 163 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 SPNS1Q9H2V7 528 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 TP63Q9H3D4 680 aaPredicted RBP19.72■□□□□ 0.75
TRAF4-203ENST00000394925 KCNJ16Q9NPI9 418 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 PRDM9Q9NQV7 894 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 ARL15Q9NXU5 204 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 TAS2R13Q9NYV9 303 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 TNFRSF10DQ9UBN6 386 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 ZFP69BQ9UJL9 534 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 FBXW2Q9UKT8 454 aa19.72■□□□□ 0.75
TRAF4-203ENST00000394925 PHF3Q92576 2039 aaKnown RBP19.71■□□□□ 0.75
TRAF4-203ENST00000394925 IGKV3D-11A0A0A0MRZ8 115 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 TOXO94900 526 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 RNH1P13489 461 aaKnown RBP19.71■□□□□ 0.75
TRAF4-203ENST00000394925 CLCN2P51788 898 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 NR0B1P51843 470 aaKnown RBP19.71■□□□□ 0.75
TRAF4-203ENST00000394925 ARHGAP11AQ6P4F7 1023 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 TMEM200AQ86VY9 491 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 CCDC71Q8IV32 467 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-203ENST00000394925 ZFP62Q8NB50 900 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-203ENST00000394925 APCDD1LQ8NCL9 501 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 ARMC2Q8NEN0 867 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 OR56A3Q8NH54 315 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 ZNF559Q9BR84 538 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 DEFB127Q9H1M4 99 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 ZFATQ9P243 1243 aa19.71■□□□□ 0.75
TRAF4-203ENST00000394925 AKAP6Q13023 2319 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 CTAGE15A4D2H0 777 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 PABPN1LA6NDY0 278 aaKnown RBP19.7■□□□□ 0.74
TRAF4-203ENST00000394925 ITGA10O75578 1167 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 MSX1P28360 303 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 SCTRP47872 440 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 CDKN2DP55273 166 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 PMPCAQ10713 525 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 CSHL1Q14406 222 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 RBM20Q5T481 1227 aaKnown RBP19.7■□□□□ 0.74
TRAF4-203ENST00000394925 TTC27Q6P3X3 843 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 STRA8Q7Z7C7 330 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 CTAGE6Q86UF2 777 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 DMRTC2Q8IXT2 367 aaPredicted RBP19.7■□□□□ 0.74
TRAF4-203ENST00000394925 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRAF4-203ENST00000394925 B3GNT7Q8NFL0 401 aa19.7■□□□□ 0.74
TRAF4-203ENST00000394925 NEIL2Q969S2 332 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms