RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CLIP4Q8N3C7 705 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 CPEB1Q9BZB8 566 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 MS4A12Q9NXJ0 267 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 GRM6O15303 877 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 RPLP0P05388 317 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 POU1F1P28069 291 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 TUBA1BP68363 451 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 DMC1Q14565 340 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 TUBA1AQ71U36 451 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 KIAA1958Q8N8K9 716 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 OR2A12Q8NGT7 310 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 WDR48Q8TAF3 677 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 CYB5D2Q8WUJ1 264 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 COQ8BQ96D53 544 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 LMLNQ96KR4 655 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 CDADC1Q9BWV3 514 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC46A2Q9BY10 475 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 QPCTLQ9NXS2 382 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 ANKMY1Q9P2S6 941 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 GPC6Q9Y625 555 aaPredicted RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 TRAV19A0A0A6YYK7 116 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 FAM227AF5H4B4 570 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 PCSK2P16519 638 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 CHI3L1P36222 383 aaPredicted RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 RECQLP46063 649 aaPredicted RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 POLR2LP62875 67 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 SELENBP1Q13228 472 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 KCNC3Q14003 757 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 STARD3Q14849 445 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 MICAQ29983 383 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 ARSIQ5FYB1 569 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 NEK10Q6ZWH5 1172 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 AMER2Q8N7J2 671 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF366Q8N895 744 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 OR4C15Q8NGM1 316 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 OGDHLQ9ULD0 1010 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 POFUT2Q9Y2G5 429 aa13.38□□□□□ -0.27
GAPVD1-205ENST00000394084 PRAMEF33A0A0G2JMD5 474 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 LEFTY1O75610 366 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 VIPR1P32241 457 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 S100A5P33763 92 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 UGT2B10P36537 528 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 C2orf80Q0P641 193 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 MED22Q15528 200 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 SPIN4Q56A73 249 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 C10orf62Q5T681 223 aaPredicted RBP13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 MED27Q6P2C8 311 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 UTS2BQ765I0 119 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 ARMCX6Q7L4S7 300 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 FAM129BQ96TA1 746 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 SPATA9Q9BWV2 254 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 REEP4Q9H6H4 257 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 ZNF556Q9HAH1 456 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 BRF2Q9HAW0 419 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 PLCXD1Q9NUJ7 323 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 POU2F3Q9UKI9 436 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 RAB23Q9ULC3 237 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 FAM32AQ9Y421 112 aaKnown RBP13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 SNX8Q9Y5X2 465 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 KCNE2Q9Y6J6 123 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 HTR3EA5X5Y0 456 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 RNASET2O00584 256 aaKnown RBP13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 TNFRSF21O75509 655 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 ADRA2AP08913 450 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 ANXA8P13928 327 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 WEE1P30291 646 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 C21orf58P58505 322 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC7A9P82251 487 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 SLBPQ14493 270 aaKnown RBP eCLIP13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 TMEM220Q6QAJ8 160 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 COMMD6Q7Z4G1 85 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 MMP21Q8N119 569 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 B3GNT7Q8NFL0 401 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 COL21A1Q96P44 957 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 OR5M11Q96RB7 305 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
GAPVD1-205ENST00000394084 KCNK2O95069 426 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 PABPC1P11940 636 aaKnown RBP13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 HSD3B1P14060 373 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 HSD3B2P26439 372 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 RGS6P49758 472 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 CDK6Q00534 326 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 SLC5A12Q1EHB4 618 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 SLCO4C1Q6ZQN7 724 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 CEP44Q9C0F1 390 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 NINQ8N4C6 2090 aa13.36□□□□□ -0.27
GAPVD1-205ENST00000394084 OBSL1O75147 1896 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms