RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NSUN5Q96P11 429 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 F2RL3Q96RI0 385 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SORBS1Q9BX66 1292 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 TGIF2Q9GZN2 237 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 EPN3Q9H201 632 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 LANCL2Q9NS86 450 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 C14orf105Q9NVL8 296 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 PSMC3IPQ9P2W1 217 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 ANGPTL3Q9Y5C1 460 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF462Q96JM2 2506 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 IGHV1-45A0A0A0MS14 117 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 NSG1A0A0A6YYJ2 146 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 IQANK1A0A1B0GTG1 560 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 A0A1B0GTL3 188 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ANKDD1BA6NHY2 528 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 A8MT66 165 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 E2F3O00716 465 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 PPP6CO00743 305 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR7A17O14581 309 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 SMIM24O75264 130 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 WFS1O76024 890 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 F10P00742 488 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TGFB1P01137 390 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 IGHEP01854 428 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 FHP07954 510 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 C8orf89P0DMQ9 161 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 EPB42P16452 691 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 CXCR2P25025 360 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 CERS1P27544 350 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 HSD17B3P37058 310 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ARL1P40616 181 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ST13P50502 369 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 MLLT10P55197 1068 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 BTG2P78543 158 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 RHAGQ02094 409 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 AIMP2Q13155 320 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 GTF2H2Q13888 395 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 RUNX2Q13950 521 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 PCOLCEQ15113 449 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ERCC6LQ2NKX8 1250 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 PRR30Q53SZ7 412 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 GTF2H2CQ6P1K8 395 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMEM205Q6UW68 189 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TIFABQ6ZNK6 161 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ANKRD37Q7Z713 158 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 CA13Q8N1Q1 262 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMEM151AQ8N4L1 468 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 FAM47BQ8NA70 645 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TEX19Q8NA77 164 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMEM52Q8NDY8 209 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR52B6Q8NGF0 335 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 WDR34Q96EX3 536 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 THOC3Q96J01 351 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 MAGEB10Q96LZ2 347 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 IP6K3Q96PC2 410 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 CSF3RQ99062 836 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 EFCAB11Q9BUY7 163 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 CAPS2Q9BXY5 557 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 REXO4Q9GZR2 422 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 MRPL46Q9H2W6 279 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR51B5Q9H339 312 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 C12orf65Q9H3J6 166 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 EHD1Q9H4M9 534 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF552Q9H707 407 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 NT5DC2Q9H857 520 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 NOL11Q9H8H0 719 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 IPPKQ9H8X2 491 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ACTR8Q9H981 624 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 MLXIPLQ9NP71 852 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 SEMA4BQ9NPR2 832 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 ATP13A2Q9NQ11 1180 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMEM216Q9P0N5 145 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 COPG2Q9UBF2 871 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 RNF11Q9Y3C5 154 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 PCDHGA9Q9Y5G4 932 aaKnown RBP7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 CSAG2Q9Y5P2 127 aa7.23□□□□□ -1.25
HMGB3P1-201ENST00000393368 MYOCOSA0A1B0GUC4 107 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 A8MUA0 341 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 CLEC3AO75596 197 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZIC2O95409 532 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 HPP00738 406 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 RBP1P09455 135 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ITGAMP11215 1152 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 COL6A2P12110 1019 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MAOAP21397 527 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 NEK2P51955 445 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 HNRNPFP52597 415 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 CDH13P55290 713 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 STXBP1P61764 594 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 RPS13P62277 151 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TLE1Q04724 770 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLRB1Q12918 225 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 LAPTM5Q13571 262 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MYBPC3Q14896 1274 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ABRAXAS2Q15018 415 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 PCBP2Q15366 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TBCCQ15814 346 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 IGFBP7Q16270 282 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 CPSF6Q16630 551 aaKnown RBP eCLIP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 HIST2H2ACQ16777 129 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms