RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 D6RAR5 112 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 H3BRB1 525 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 LINC01387J3KSC0 135 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PGRMC2O15173 223 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 HOXA2O43364 376 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 BEST1O76090 585 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 DIRAS1O95057 198 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 VIPP01282 170 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FABP3P05413 133 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 EDN3P14138 238 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 GRK5P34947 590 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ADCYAP1R1P41586 468 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PSMD8P48556 350 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 LAMTOR4Q0VGL1 99 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SREBF2Q12772 1141 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PDZK1IP1Q13113 114 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KRBOX4Q5JUW0 171 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 NADSYN1Q6IA69 706 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 NAA40Q86UY6 237 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CCDC116Q8IYX3 515 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FBXO39Q8N4B4 442 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 C11orf65Q8NCR3 313 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 OR52H1Q8NGJ2 320 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ZDHHC1Q8WTX9 485 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FDXACB1Q9BRP7 624 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 MTG2Q9H4K7 406 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 DUSP21Q9H596 190 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 C11orf16Q9NQ32 467 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 DZANK1Q9NVP4 752 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 WRAP73Q9P2S5 460 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KCNIP3Q9Y2W7 256 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SPIN1Q9Y657 262 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 NINQ8N4C6 2090 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TERTO14746 1132 aaKnown RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PCDH17O14917 1159 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TSPAN12O95859 305 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 GJB1P08034 283 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CPB1P15086 417 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FPR1P21462 350 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FPR3P25089 353 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 APEX1P27695 318 aaKnown RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ARRB2P32121 409 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KCNJ3P48549 501 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 DPY19L1Q2PZI1 675 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 EIF2S3LQ2VIR3 472 aaKnown RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 IQCCQ4KMZ1 466 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 VASNQ6EMK4 673 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CNIH2Q6PI25 160 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FAM122BQ7Z309 247 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PLEKHH3Q7Z736 793 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CYP4Z1Q86W10 505 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PSTKQ8IV42 348 aaKnown RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 BEST4Q8NFU0 473 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 STOML3Q8TAV4 291 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TNFAIP8L1Q8WVP5 186 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM125Q96AQ2 219 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 GAS2L1Q99501 681 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 LGMNQ99538 433 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 S100A13Q99584 98 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 MYOCQ99972 504 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 MAGEB5Q9BZ81 275 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ANKRD19PQ9H560 264 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 VSX1Q9NZR4 365 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PTGFRNQ9P2B2 879 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 MGAT4CQ9UBM8 478 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 MRTO4Q9UKD2 239 aaKnown RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF214Q9UL59 606 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 OR10H1Q9Y4A9 318 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 AKAP11Q9UKA4 1901 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KANTRA0A1W2PQU2 76 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TTC24A2A3L6 582 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ANKDD1BA6NHY2 528 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ANKRD28O15084 1053 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 RAB3DO95716 219 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PAK4O96013 591 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TFP02787 698 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CFHP08603 1231 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ADRA1BP35368 520 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CASP6P55212 293 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 OGDHQ02218 1023 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PEA15Q15121 130 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ALG11Q2TAA5 492 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 GPR33Q49SQ1 333 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 KDELC1Q6UW63 502 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ENPP6Q6UWR7 440 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 LBX2Q6XYB7 198 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 HSDL2Q6YN16 418 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 NLRP8Q86W28 1048 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CEP97Q8IW35 865 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 IZUMO1Q8IYV9 350 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 DENND6BQ8NEG7 585 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 OR4A15Q8NGL6 344 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SLC38A2Q96QD8 506 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF385DQ9H6B1 395 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 METTL17Q9H7H0 456 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CASS4Q9NQ75 786 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 RNF19AQ9NV58 838 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 EXTL2Q9UBQ6 330 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF69Q9UC07 566 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms