RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 WDR45Q9Y484 360 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ANKRD12Q6UB98 2062 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 MAP2K4P45985 399 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 NFATC2Q13469 925 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 CBFBQ13951 182 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 KCNC3Q14003 757 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 KLHL26Q53HC5 615 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 SUSD1Q6UWL2 747 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 AUTS2Q8WXX7 1259 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ZNF778Q96MU6 729 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 SEZ6LQ9BYH1 1024 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ELOVL2Q9NXB9 296 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 MT-ND5P03915 603 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 OR4D2P58180 307 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 TAS2R43P59537 309 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 C10orf62Q5T681 223 aaPredicted RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 DCUN1D3Q8IWE4 304 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ZNF527Q8NB42 609 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 OSTF1Q92882 214 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 NUP50Q9UKX7 468 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
LCA5-202ENST00000392959 STATHP02808 62 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 STT3AP46977 705 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 NIPAL4Q0D2K0 466 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 PLEKHS1Q5SXH7 462 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZNF367Q7RTV3 350 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 GALNT7Q86SF2 657 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZNF461Q8TAF7 563 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 PCYT2Q99447 389 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 OR51I1Q9H343 314 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 NUDT15Q9NV35 164 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 TAS2R9Q9NYW1 312 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 STOX2Q9P2F5 926 aaPredicted RBP12.67□□□□□ -0.38
LCA5-202ENST00000392959 CDH10Q9Y6N8 788 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZSCAN5BA6NJL1 495 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 PRLP01236 227 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 MATN1P21941 496 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 VAMP1P23763 118 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 GMPRP36959 345 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZNF423Q2M1K9 1284 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 SPRED3Q2MJR0 410 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 CTC1Q2NKJ3 1217 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 TBRG1Q3YBR2 411 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 SCGB2B2Q4G0G5 96 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 C2orf27AQ580R0 203 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZFAND4Q86XD8 727 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 KRTCAP2Q8N6L1 136 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 DRAXINQ8NBI3 349 aaPredicted RBP12.67□□□□□ -0.38
LCA5-202ENST00000392959 TRUB1Q8WWH5 349 aaKnown RBP12.67□□□□□ -0.38
LCA5-202ENST00000392959 ACOT12Q8WYK0 555 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 BIRC8Q96P09 236 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 DOHHQ9BU89 302 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 Q9N2J8 555 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 CNOT11Q9UKZ1 510 aaKnown RBP12.67□□□□□ -0.38
LCA5-202ENST00000392959 PTGDR2Q9Y5Y4 395 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 MYH8P13535 1937 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZNF670-ZNF695F2Z2N8 137 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 INHAP05111 366 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 C8orf89P0DMQ9 161 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 EPCAMP16422 314 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 RIT1Q92963 219 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 MGLLQ99685 303 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 MCHR1Q99705 422 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 TTYH2Q9BSA4 534 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 TMEM175Q9BSA9 504 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 FOXD2O60548 495 aaPredicted RBP12.67□□□□□ -0.38
LCA5-202ENST00000392959 MMP20O60882 483 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 AOC2O75106 756 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 RPS3P23396 243 aaKnown RBP eCLIP12.67□□□□□ -0.38
LCA5-202ENST00000392959 PPIGQ13427 754 aaKnown RBP eCLIP12.67□□□□□ -0.38
LCA5-202ENST00000392959 UGT8Q16880 541 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 SMU1Q2TAY7 513 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 PIGGQ5H8A4 983 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 SLC35F1Q5T1Q4 408 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 ZNF101Q8IZC7 436 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 CHCHD4Q8N4Q1 142 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 THAP6Q8TBB0 222 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 EPYCQ99645 322 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 DNAJC15Q9Y5T4 150 aa12.67□□□□□ -0.38
LCA5-202ENST00000392959 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 SOCS5O75159 536 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 COQ9O75208 318 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 FADDQ13158 208 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 LIPJQ5W064 366 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 DLK2Q6UY11 383 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 PNLDC1Q8NA58 520 aaKnown RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 S100A16Q96FQ6 103 aaKnown RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 ZC3H10Q96K80 434 aaKnown RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 HIST1H2AAQ96QV6 131 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 HPF1Q9NWY4 346 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 MARCH4Q9P2E8 410 aaPredicted RBP12.66□□□□□ -0.38
LCA5-202ENST00000392959 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
LCA5-202ENST00000392959 FLRT2O43155 660 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms