RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 RETREG1Q9H6L5 497 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 CHD7Q9P2D1 2997 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 PRAMEF33A0A0G2JMD5 474 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 PRAMEF10O60809 474 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 SOCS5O75159 536 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 SOX3P41225 446 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 CTSCP53634 463 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 SNRPD1P62314 119 aaKnown RBP20.14■□□□□ 0.82
COL23A1-201ENST00000390654 TUBA1BP68363 451 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 VEZF1Q14119 521 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 SYTL3Q4VX76 610 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 TUBA1AQ71U36 451 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 HSD11B1LQ7Z5J1 315 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 SORBS1Q9BX66 1292 aaKnown RBP20.14■□□□□ 0.82
COL23A1-201ENST00000390654 TP63Q9H3D4 680 aaPredicted RBP20.14■□□□□ 0.82
COL23A1-201ENST00000390654 CPNE5Q9HCH3 593 aa20.14■□□□□ 0.82
COL23A1-201ENST00000390654 EXO1Q9UQ84 846 aaKnown RBP20.14■□□□□ 0.82
COL23A1-201ENST00000390654 CFAP20Q9Y6A4 193 aaKnown RBP20.14■□□□□ 0.82
COL23A1-201ENST00000390654 AGAP14A8MT82 685 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 GFYI3L273 518 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 KMOO15229 486 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 CCNKO75909 580 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 MED26O95402 600 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 HLA-FP30511 346 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 DAB2P98082 770 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 MXD1Q05195 221 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 SCARB2Q14108 478 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 PTGES3Q15185 160 aaKnown RBP20.14■□□□□ 0.81
COL23A1-201ENST00000390654 ZMAT1Q5H9K5 638 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 SPANXN2Q5MJ10 180 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 DEPDC1Q5TB30 811 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 CBARPQ8N350 705 aaPredicted RBP20.14■□□□□ 0.81
COL23A1-201ENST00000390654 NEIL2Q969S2 332 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 VOPP1Q96AW1 172 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 DMRTB1Q96MA1 342 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 MRPL9Q9BYD2 267 aaKnown RBP20.14■□□□□ 0.81
COL23A1-201ENST00000390654 ZNF556Q9HAH1 456 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 HMX1Q9NP08 348 aaPredicted RBP20.14■□□□□ 0.81
COL23A1-201ENST00000390654 SH2B3Q9UQQ2 575 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 A0A0C4DFX4 3053 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 FRMPD3Q5JV73 1810 aa20.14■□□□□ 0.81
COL23A1-201ENST00000390654 UBE2J2Q8N2K1 259 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 KIAA1958Q8N8K9 716 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 AQP11Q8NBQ7 271 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 LOC110117498-PIK3R3F6TDL0 507 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 TFECO14948 347 aaPredicted RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 ADAMDEC1O15204 470 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 ZW10O43264 779 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 PRPH2P23942 346 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 CHI3L1P36222 383 aaPredicted RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 CSNK1DP48730 415 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 STARD3Q14849 445 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 TAB1Q15750 504 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 ZNF181Q2M3W8 571 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 GPR155Q7Z3F1 870 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 OVCA2Q8WZ82 227 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 MGLLQ99685 303 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 SP140LQ9H930 580 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 DDX28Q9NUL7 540 aaKnown RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 BMPR1AP36894 532 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 CASP3P42574 277 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 TM4SF4P48230 202 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 EPHB3P54753 998 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 CSTF3Q12996 717 aaKnown RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 IFI44LQ53G44 452 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 METTL2BQ6P1Q9 378 aaKnown RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 LINC00299Q6ZSB3 139 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 PTCHD4Q6ZW05 846 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 HMGN2P46Q86SG4 172 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 COL21A1Q96P44 957 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 NEDD4LQ96PU5 975 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 VPS35Q96QK1 796 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 CEP44Q9C0F1 390 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 CHST8Q9H2A9 424 aa20.13■□□□□ 0.81
COL23A1-201ENST00000390654 SPATA6Q9NWH7 488 aaPredicted RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 STOX2Q9P2F5 926 aaPredicted RBP20.13■□□□□ 0.81
COL23A1-201ENST00000390654 ARHGEF15O94989 841 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 MFN2O95140 757 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 CNR2P34972 360 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 SLC5A12Q1EHB4 618 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 MICAQ29983 383 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 RPS26P11Q5JNZ5 115 aaPredicted RBP20.12■□□□□ 0.81
COL23A1-201ENST00000390654 NXNL2Q5VZ03 156 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 GAREM2Q75VX8 874 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 KBTBD8Q8NFY9 601 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 WDR48Q8TAF3 677 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 FCGR1BQ92637 280 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 CLP1Q92989 425 aaKnown RBP20.12■□□□□ 0.81
COL23A1-201ENST00000390654 RIOK2Q9BVS4 552 aaKnown RBP20.12■□□□□ 0.81
COL23A1-201ENST00000390654 CLEC2DQ9UHP7 191 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 CCL26Q9Y258 94 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 BOLA1Q9Y3E2 137 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 GASTP01350 101 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 UGT2B15P54855 530 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 IFITM2Q01629 132 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 BCL7AQ4VC05 210 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 C22orf39Q6P5X5 142 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 WDR53Q7Z5U6 358 aaPredicted RBP20.12■□□□□ 0.81
COL23A1-201ENST00000390654 C11orf74Q86VG3 221 aa20.12■□□□□ 0.81
COL23A1-201ENST00000390654 ASZ1Q8WWH4 475 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms