RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 OMA1Q96E52 524 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 RUFY1Q96T51 708 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 PCDHB18PQ96TA0 734 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 SPXQ9BT56 116 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 ACPTQ9BZG2 426 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 TNMDQ9H2S6 317 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 VIPAS39Q9H9C1 493 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 ANO10Q9NW15 660 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 TEKT2Q9UIF3 430 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 A0A087WZ39 114 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 TRBV2A0A0J9YWF9 115 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 SLC15A5A6NIM6 579 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF732B4DXR9 585 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 SAP30O75446 220 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 ABHD2P08910 425 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 EZRP15311 586 aaKnown RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 TYMPP19971 482 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 STIP1P31948 543 aaKnown RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 HUNKP57058 714 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 WASHC5Q12768 1159 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 PPP1R8Q12972 351 aaKnown RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 TSTA3Q13630 321 aaPredicted RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 CEACAM7Q14002 265 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 HFEQ30201 348 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 C9orf50Q5SZB4 431 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 RFPL4BQ6ZWI9 263 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 MIER3Q7Z3K6 550 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 PTAR1Q7Z6K3 402 aaPredicted RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 TEX26Q8N6G2 289 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 NEK11Q8NG66 645 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 SPATA18Q8TC71 538 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 RNASE8Q8TDE3 154 aaKnown RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 CASP10Q92851 521 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 BPIFA2Q96DR5 249 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 EPSTI1Q96J88 318 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF560Q96MR9 790 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 GUCD1Q96NT3 240 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 TEX13AQ9BXU3 409 aaPredicted RBP4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 PLCL2Q9UPR0 1127 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 EXOC7Q9UPT5 735 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 PPP1R3CQ9UQK1 317 aa4.75□□□□□ -1.65
RNU6-40P-201ENST00000384254 SURF4O15260 269 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 SYT7O43581 403 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 MAGEC1O60732 1142 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 KHDRBS3O75525 346 aaKnown RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 BCAS2O75934 225 aaPredicted RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 NXPH2O95156 264 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 PATE4P0C8F1 98 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 CCDC192P0DO97 292 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 ANPEPP15144 967 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 GNB3P16520 340 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 CEBPBP17676 345 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 PTMSP20962 102 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 HLA-FP30511 346 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 LEPRP48357 1165 aaKnown RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 CLCN4P51793 760 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 XGP55808 180 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 CNTN1Q12860 1018 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 TAB1Q15750 504 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 FAM106AQ4KMX7 169 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF776Q68DI1 518 aaPredicted RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 TRIM58Q8NG06 486 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 HAS2Q92819 552 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF274Q96GC6 653 aaPredicted RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 GMPPAQ96IJ6 420 aaPredicted RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 LRR1Q96L50 414 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 DUX3Q96PT4 197 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 CLEC7AQ9BXN2 247 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 DGCR6LQ9BY27 220 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 DDX47Q9H0S4 455 aaKnown RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 ABCG4Q9H172 646 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 WDR13Q9H1Z4 485 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 MARCH7Q9H992 704 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 GPN1Q9HCN4 374 aaPredicted RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 MIS18AQ9NYP9 233 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 TRMT6Q9UJA5 497 aaKnown RBP4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 ETV7Q9Y603 341 aa4.74□□□□□ -1.65
RNU6-40P-201ENST00000384254 RNF103-CHMP3A0A140T963 221 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 IQCMA0A1B0GVH7 501 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 SLC9B1P1A6NJY1 282 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 RNF103O00237 685 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 PSMD3O43242 534 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 AREGP15514 252 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 UGT1A6P19224 532 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 GIFP27352 417 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 SOX3P41225 446 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 PDE7AQ13946 482 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 KRT31Q15323 416 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 WLSQ5T9L3 541 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 LYPLAL1Q5VWZ2 237 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 SNRNP48Q6IEG0 339 aaKnown RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 PWWP2BQ6NUJ5 590 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 TATDN1Q6P1N9 297 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 Q6ZSR9 355 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 C5orf24Q7Z6I8 188 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZER1Q7Z7L7 766 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZC3H3Q8IXZ2 948 aaKnown RBP4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 BATF2Q8N1L9 274 aa4.73□□□□□ -1.65
RNU6-40P-201ENST00000384254 LEMD2Q8NC56 503 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms