RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 DNAJB8Q8NHS0 232 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 ITLN2Q8WWU7 325 aaPredicted RBP13.28□□□□□ -0.28
SHOX-202ENST00000381575 SREK1Q8WXA9 508 aaKnown RBP13.28□□□□□ -0.28
SHOX-202ENST00000381575 RELTQ969Z4 430 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 LRRC39Q96DD0 335 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
SHOX-202ENST00000381575 KRT12Q99456 494 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 NAPGQ99747 312 aaPredicted RBP13.28□□□□□ -0.28
SHOX-202ENST00000381575 AIF1LQ9BQI0 150 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 SLC6A16Q9GZN6 736 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 PELI2Q9HAT8 420 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 NECTIN3Q9NQS3 549 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 CSMD2Q7Z408 3487 aa13.28□□□□□ -0.28
SHOX-202ENST00000381575 CCDC168Q8NDH2 2452 aa13.27□□□□□ -0.28
SHOX-202ENST00000381575 OTOGQ6ZRI0 2925 aa13.27□□□□□ -0.28
SHOX-202ENST00000381575 PRMT3O60678 531 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 WDR47O94967 919 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 JAK1P23458 1154 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 AHRP35869 848 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 GMPRP36959 345 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 TAS2R50P59544 299 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 C3AR1Q16581 482 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
SHOX-202ENST00000381575 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 GALNTL5Q7Z4T8 443 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 ZBED8Q8IZ13 594 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 NKAPQ8N5F7 415 aaKnown RBP13.27□□□□□ -0.29
SHOX-202ENST00000381575 SLC5A8Q8N695 610 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 CREB3L4Q8TEY5 395 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 THAP3Q8WTV1 239 aaPredicted RBP13.27□□□□□ -0.29
SHOX-202ENST00000381575 CCT6BQ92526 530 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 VPS39Q96JC1 886 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 DPH5Q9H2P9 285 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 MOCS1Q9NZB8 636 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 CTNNAL1Q9UBT7 734 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 MTO1Q9Y2Z2 717 aaKnown RBP13.27□□□□□ -0.29
SHOX-202ENST00000381575 OARD1Q9Y530 152 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 SAR1BQ9Y6B6 198 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 PDZD2O15018 2839 aa13.27□□□□□ -0.29
SHOX-202ENST00000381575 CXorf49A8MYA2 514 aaPredicted RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 NPIPA5E9PKD4 350 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 PSMD12O00232 456 aaPredicted RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 PHGDHO43175 533 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 SLC19A2O60779 497 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 NEURL1O76050 574 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 SNRPB2P08579 225 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 MYBL2P10244 700 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 RNH1P13489 461 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 IL10P22301 178 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 TPP2P29144 1249 aaPredicted RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 EEF1DP29692 281 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 HNRNPH1P31943 449 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 CA7P43166 264 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 HSF1Q00613 529 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 FRG1Q14331 258 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 SLBPQ14493 270 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHOX-202ENST00000381575 MAPKAPK3Q16644 382 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 SP5Q6BEB4 398 aaPredicted RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 ADNP2Q6IQ32 1131 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 QSOX2Q6ZRP7 698 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 RPS19BP1Q86WX3 136 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 CA13Q8N1Q1 262 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 TRPV3Q8NET8 790 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 ELP5Q8TE02 316 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 ESAMQ96AP7 390 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 SCMH1Q96GD3 660 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 FRMD6Q96NE9 622 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 RUNDC3BQ96NL0 473 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 GPAMQ9HCL2 828 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 SUCOQ9UBS9 1254 aaKnown RBP13.26□□□□□ -0.29
SHOX-202ENST00000381575 NPIPA1Q9UND3 350 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 KCNE2Q9Y6J6 123 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 CELSR1Q9NYQ6 3014 aa13.26□□□□□ -0.29
SHOX-202ENST00000381575 MYOCOSA0A1B0GUC4 107 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 SAGE2PA6NJ88 616 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 E7ESA3 106 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 SMIM10L1P0DMW3 83 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 CD46P15529 392 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 SSTR1P30872 391 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 HNRNPFP52597 415 aaKnown RBP13.25□□□□□ -0.29
SHOX-202ENST00000381575 SKP1P63208 163 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 BTN3A2P78410 334 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 ALDH6A1Q02252 535 aaKnown RBP13.25□□□□□ -0.29
SHOX-202ENST00000381575 SLCO4C1Q6ZQN7 724 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 ADAMTSL2Q86TH1 951 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 CPSF7Q8N684 471 aaKnown RBP13.25□□□□□ -0.29
SHOX-202ENST00000381575 TMEM52Q8NDY8 209 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 EXT2Q93063 718 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 RHBDF1Q96CC6 855 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 SMIM10Q96HG1 83 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 TMEM79Q9BSE2 394 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 SAYSD1Q9NPB0 183 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 LRFN1Q9P244 771 aa13.25□□□□□ -0.29
SHOX-202ENST00000381575 ENTPD4Q9Y227 616 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms