RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 C16orf47Q6ZP98 133 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-203ENST00000380748 QSOX2Q6ZRP7 698 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 KIAA0408Q6ZU52 694 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 TRILQ7L0X0 811 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 AFAP1L2Q8N4X5 818 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 RELL2Q8NC24 303 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-203ENST00000380748 FBXO15Q8NCQ5 510 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-203ENST00000380748 ZNF740Q8NDX6 193 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 PLEKHF2Q9H8W4 249 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 NEUROD4Q9HD90 331 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 NECTIN3Q9NQS3 549 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 ZNF223Q9UK11 482 aaPredicted RBP16.12■□□□□ 0.17
HMGN1-203ENST00000380748 ERVK-11Q9UQG0 969 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 CRYL1Q9Y2S2 319 aa16.12■□□□□ 0.17
HMGN1-203ENST00000380748 IGKV3D-11A0A0A0MRZ8 115 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 TCRBV7S2A1N4TA0A589 114 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 GOLGA6L9A6NEM1 432 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 FAM171A2A8MVW0 826 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 GOLGA8KD6RF30 607 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 H3BMM5 538 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 GOLGA8TH3BQL2 631 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 GLSO94925 669 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 ESR1P03372 595 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 PTMAP06454 111 aaKnown RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 CELA3AP09093 270 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 TPM1P09493 284 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 SLC35G6P0C7Q6 338 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 TACR1P25103 407 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 PEX19P40855 299 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 SSR4P51571 173 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 CLCN2P51788 898 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 SESN2P58004 480 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 NKX6-1P78426 367 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 HERC3Q15034 1050 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 DAZAP2Q15038 168 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 PCID2Q5JVF3 399 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 RIPPLY2Q5TAB7 128 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 PRUNE1Q86TP1 453 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 SLC22A16Q86VW1 577 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 ASB11Q8WXH4 323 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 PANX2Q96RD6 677 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 SH3GL2Q99962 352 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 SARGQ9BW04 601 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 CCDC177Q9NQR7 707 aaPredicted RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
HMGN1-203ENST00000380748 PCDHA13Q9Y5I0 950 aa16.11■□□□□ 0.17
HMGN1-203ENST00000380748 A0A1B0GVC2 190 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 A8MVJ9 347 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 AQP7O14520 342 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 WDR1O75083 606 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 FDFT1P37268 417 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 SKIV2L2P42285 1042 aaKnown RBP16.1■□□□□ 0.17
HMGN1-203ENST00000380748 MAGEA5P43359 124 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 DCAF7P61962 342 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 KLF1Q13351 362 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-203ENST00000380748 CUL1Q13616 776 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 PCBP2Q15366 365 aaKnown RBP eCLIP16.1■□□□□ 0.17
HMGN1-203ENST00000380748 RPS6KA1Q15418 735 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 RGS9BPQ6ZS82 235 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 CIARTQ8N365 385 aaPredicted RBP16.1■□□□□ 0.17
HMGN1-203ENST00000380748 TMEM251Q8N6I4 163 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 B3GNT7Q8NFL0 401 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 GIMAP7Q8NHV1 300 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 ATG4AQ8WYN0 398 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 COX4I2Q96KJ9 171 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 LIN28AQ9H9Z2 209 aaKnown RBP16.1■□□□□ 0.17
HMGN1-203ENST00000380748 HPF1Q9NWY4 346 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 ALKBH4Q9NXW9 302 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 B4GALT7Q9UBV7 327 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 ACAD8Q9UKU7 415 aa16.1■□□□□ 0.17
HMGN1-203ENST00000380748 ARHGAP21Q5T5U3 1957 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 EML6Q6ZMW3 1958 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 SYCE3A1L190 88 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 E5RI56 91 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 NDUFS4O43181 175 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 PRKNO60260 465 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-203ENST00000380748 MYO1DO94832 1006 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 OR6B1O95007 311 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 VAPBO95292 243 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 APRTP07741 180 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 CD53P19397 219 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 CLCN7P51798 805 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 MEF2AQ02078 507 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-203ENST00000380748 RNF187Q5TA31 235 aaPredicted RBP16.09■□□□□ 0.17
HMGN1-203ENST00000380748 MRNIPQ6NTE8 343 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 CES3Q6UWW8 571 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 IL20RBQ6UXL0 311 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 VSTM4Q8IW00 320 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 VWA5B2Q8N398 1253 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 FAM109AQ8N4B1 249 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 PRELID2Q8N945 189 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 MFSD9Q8NBP5 474 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 PRDM9Q9NQV7 894 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 ADAM21Q9UKJ8 722 aa16.09■□□□□ 0.17
HMGN1-203ENST00000380748 YARS2Q9Y2Z4 477 aaKnown RBP16.09■□□□□ 0.17
HMGN1-203ENST00000380748 FAM47E-STBD1D6RA91 191 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 GFYI3L273 518 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 CEP104O60308 925 aa16.08■□□□□ 0.16
HMGN1-203ENST00000380748 OR2J2O76002 312 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms