RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 CLLU1Q5K131 121 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 BICRALQ6AI39 1079 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 PSAPL1Q6NUJ1 521 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 PROKR2Q8NFJ6 384 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 NECTIN4Q96NY8 510 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 PANX1Q96RD7 426 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 NIPSNAP1Q9BPW8 284 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 PPP1R3EQ9H7J1 279 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 ELOVL2Q9NXB9 296 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 ZNF451Q9Y4E5 1061 aa13.17□□□□□ -0.3
KIF3A-201ENST00000378735 ARRDC5A6NEK1 342 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PTGESO14684 152 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 LPOP22079 712 aaPredicted RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PCGF2P35227 344 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SOX3P41225 446 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 YBEYP58557 167 aaPredicted RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SNRPGP62308 76 aaKnown RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 CACNB2Q08289 660 aaPredicted RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 HNRNPA0Q13151 305 aaKnown RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 GALEQ14376 348 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 TEAD4Q15561 434 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PTCHD3Q3KNS1 767 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 KLHL12Q53G59 568 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PRSS42Q7Z5A4 293 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 UPRTQ96BW1 309 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 ZBED6CLQ96FA7 236 aaPredicted RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 KCNJ15Q99712 375 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 P2RY12Q9H244 342 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SGK494L7N484 410 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PRAMEF11O60813 436 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SERPINI2O75830 405 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SDC1P18827 310 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 HK1P19367 917 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PRPS1L1P21108 318 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SOX9P48436 509 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 CDKN1CP49918 316 aaPredicted RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SELENOWP63302 87 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 DSC3Q14574 896 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 PTGES3Q15185 160 aaKnown RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 SGO1Q5FBB7 561 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 OR8H3Q8N146 312 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 THSD1Q9NS62 852 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 RLIMQ9NVW2 624 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 FAM120CQ9NX05 1096 aaKnown RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 TMCC3Q9ULS5 477 aa13.16□□□□□ -0.3
KIF3A-201ENST00000378735 MRPL42Q9Y6G3 142 aaKnown RBP13.16□□□□□ -0.3
KIF3A-201ENST00000378735 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 RAMP2O60895 175 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 EPB42P16452 691 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 MC4RP32245 332 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 HMGCLP35914 325 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 MAN2A2P49641 1150 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 CRYBA2P53672 197 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 C1DQ13901 141 aaKnown RBP13.15□□□□□ -0.3
KIF3A-201ENST00000378735 GRK1Q15835 563 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 AANATQ16613 207 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 BRAT1Q6PJG6 821 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 PHC2Q8IXK0 858 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 Q8N402 240 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 SLC37A3Q8NCC5 494 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 FAM46DQ8NEK8 389 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 ATP6V1C2Q8NEY4 427 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 MRPL9Q9BYD2 267 aaKnown RBP13.15□□□□□ -0.3
KIF3A-201ENST00000378735 CHST8Q9H2A9 424 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.3
KIF3A-201ENST00000378735 TXNL4BQ9NX01 149 aaKnown RBP13.15□□□□□ -0.3
KIF3A-201ENST00000378735 FTSJ1Q9UET6 329 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 CSNK1G3Q9Y6M4 447 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 RNF215Q9Y6U7 377 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 A0A1B0GVM2 712 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 H7C0S8 307 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 RGS4P49798 205 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 ALFQ53S48 1182 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 GPR139Q6DWJ6 353 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 KLHL17Q6TDP4 642 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 GPAT4Q86UL3 456 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 ZNF431Q8TF32 576 aaPredicted RBP13.15□□□□□ -0.3
KIF3A-201ENST00000378735 TSSK3Q96PN8 268 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 ACBD6Q9BR61 282 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
KIF3A-201ENST00000378735 EMC7Q9NPA0 242 aa13.15□□□□□ -0.3
KIF3A-201ENST00000378735 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms