RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 AOC2O75106 756 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ATG13O75143 517 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 UPK1BO75841 260 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 FURINP09958 794 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 POLR2EP19388 210 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 XCR1P46094 333 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 VASPP50552 380 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 CD300CQ08708 224 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF763Q0D2J5 394 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 DDX39BQ13838 428 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF404Q494X3 552 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 IFI44LQ53G44 452 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 MED27Q6P2C8 311 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 USP43Q70EL4 1123 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 P3H2Q8IVL5 708 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 LILRA3Q8N6C8 439 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 OR10G2Q8NGC3 310 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 HEPHQ9BQS7 1158 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 EHD1Q9H4M9 534 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ZBTB20Q9HC78 741 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 DKK3Q9UBP4 350 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 CCL26Q9Y258 94 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 MGAT4DA6NG13 374 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 AIREO43918 545 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 GPR37L1O60883 481 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 C1orf105O95561 183 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ETFAP13804 333 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 NPPBP16860 134 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 CTSKP43235 329 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 BDKRB1P46663 353 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 FAM71E1Q6IPT2 247 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 PROX1Q92786 737 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 GLYATL1Q969I3 302 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 TMEM159Q96B96 161 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 REPS1Q96D71 796 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 MED8Q96G25 268 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 NIPSNAP1Q9BPW8 284 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 SGPP1Q9BX95 441 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ZBP1Q9H171 429 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 MYNNQ9NPC7 610 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ACER3Q9NUN7 267 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 CCDC59Q9P031 241 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 TESMINQ9Y4I5 508 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 PTPRSQ13332 1948 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 AGAP5A6NIR3 686 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 NDUFB5O43674 189 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 LILRB5O75023 590 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 LEFTY1O75610 366 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 RECKO95980 971 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CTSLP07711 333 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 GJA1P17302 382 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 GADD45AP24522 165 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 GRK5P34947 590 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 PREPP48147 710 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 TMEM115Q12893 351 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-202ENST00000376545 TIGD6Q17RP2 521 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF181Q2M3W8 571 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 PLD3Q8IV08 490 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF557Q8N988 423 aaPredicted RBP10.23□□□□□ -0.77
ABCF1-202ENST00000376545 MCFD2Q8NI22 146 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF480Q8WV37 535 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 MTERF3Q96E29 417 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 COL21A1Q96P44 957 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ARPC5LQ9BPX5 153 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CORO1BQ9BR76 489 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 SMG9Q9H0W8 520 aaKnown RBP10.23□□□□□ -0.77
ABCF1-202ENST00000376545 RUBCNLQ9H714 662 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CPNE5Q9HCH3 593 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ANKMY1Q9P2S6 941 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 WDR37Q9Y2I8 494 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 KLK4Q9Y5K2 254 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 KCNE2Q9Y6J6 123 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ITGA2P17301 1181 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CBLP22681 906 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 AQP1P29972 269 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ETV6P41212 452 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CCR2P41597 374 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 SCARB2Q14108 478 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 SYT16Q17RD7 645 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 PRSS53Q2L4Q9 553 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 GCNT6Q5T4J0 391 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 OTOP2Q7RTS6 562 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 NRSN1Q8IZ57 195 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 DEPDC4Q8N2C3 294 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 OXR1Q8N573 874 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 PSMA8Q8TAA3 256 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF675Q8TD23 568 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 APOBEC4Q8WW27 367 aaKnown RBP10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CRELD1Q96HD1 420 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 SLC35A5Q9BS91 424 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 CDADC1Q9BWV3 514 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 DMRT3Q9NQL9 472 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 RAPGEFL1Q9UHV5 662 aa10.23□□□□□ -0.77
ABCF1-202ENST00000376545 SAGE2PA6NJ88 616 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CNOT3O75175 753 aaKnown RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ADORA3P0DMS8 318 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CHMP24386 653 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms