RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 TM6SF2Q9BZW4 377 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 ATP13A1Q9HD20 1204 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 MCUBQ9NWR8 336 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 PDP1Q9P0J1 537 aaPredicted RBP11.71□□□□□ -0.54
C9orf3-203ENST00000375315 CMAHPQ9Y471 501 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 CSNK1G3Q9Y6M4 447 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 COL4A6Q14031 1691 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 WASHC1A8K0Z3 465 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 EFCAB14O75071 495 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 RHOCP08134 193 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 FPR1P21462 350 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 DNAJA1P31689 397 aaKnown RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SLC19A1P41440 591 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 NRIP1P48552 1158 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 PSPHP78330 225 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 HOXC5Q00444 222 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 UBE3AQ05086 875 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF235Q14590 738 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF789Q5FWF6 425 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 LCN1P1Q5VSP4 162 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 RNF219Q5W0B1 726 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 MZT2BQ6NZ67 158 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 KLHL17Q6TDP4 642 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 CEP68Q76N32 757 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SNX20Q7Z614 316 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 DNAJC22Q8N4W6 341 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 EFHBQ8N7U6 833 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 BARD1Q99728 777 aaKnown RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ASPNQ9BXN1 380 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 EXOSC4Q9NPD3 245 aaKnown RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SEMA4BQ9NPR2 832 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ING4Q9UNL4 249 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 FGF10O15520 208 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 CSF3P09919 207 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 RHOQP17081 205 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 EPHA2P29317 976 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 HOXA9P31269 272 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 MAP2K3P46734 347 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 GBX2P52951 348 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 RAB14P61106 215 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 CYP4F2P78329 520 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 NPRL3Q12980 569 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF177Q13360 481 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ZMYND11Q15326 602 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 XKR7Q5GH72 579 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SAXO2Q658L1 398 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ANKRD54Q6NXT1 300 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 CCDC71Q8IV32 467 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 CCDC117Q8IWD4 279 aaPredicted RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 BBS7Q8IWZ6 715 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF366Q8N895 744 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 GGHQ92820 318 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SEMA3CQ99985 751 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 MCCC2Q9HCC0 563 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 IFT46Q9NQC8 304 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 VAPAQ9P0L0 249 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 CLEC4EQ9ULY5 219 aa11.7□□□□□ -0.54
C9orf3-203ENST00000375315 SPTBN5Q9NRC6 3674 aaKnown RBP11.7□□□□□ -0.54
C9orf3-203ENST00000375315 PTHP01270 115 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 IFNA7P01567 189 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TP53P04637 393 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 F8A1P23610 371 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TPMTP51580 245 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 RIPPLY1Q0D2K3 151 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TP53BP2Q13625 1128 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TEAD2Q15562 447 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 HKDC1Q2TB90 917 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CARD16Q5EG05 197 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CLLU1Q5K131 121 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 C10orf62Q5T681 223 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 MANEALQ5VSG8 457 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 MLIPQ5VWP3 458 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ANKS6Q68DC2 871 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 SCIMPQ6UWF3 145 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CCDC149Q6ZUS6 474 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 WFDC5Q8TCV5 224 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF431Q8TF32 576 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ST8SIA4Q92187 359 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 GLOD4Q9HC38 313 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TREX1Q9NSU2 369 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 UBA6A0AVT1 1052 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 FABP12A6NFH5 140 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 K7ERQ8 282 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 MATN3O15232 486 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 SEC14L5O43304 696 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ANXA9O76027 345 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 STSP08842 583 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 UROSP10746 265 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 GKP32189 559 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 HTR7P34969 479 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms