RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ACPPP15309 386 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 RYKP34925 604 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SLC11A1P49279 550 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PTGR1Q14914 329 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PTCHD3Q3KNS1 767 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PKDCCQ504Y2 493 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GPRC6AQ5T6X5 926 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 KDELC1Q6UW63 502 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 KDM1BQ8NB78 822 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SETD6Q8TBK2 473 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 FNDC8Q8TC99 324 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SLC12A9Q9BXP2 914 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GSDMCQ9BYG8 508 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 RHBGQ9H310 441 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 TREX1Q9NSU2 369 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PCTPQ9UKL6 214 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 H3BSA7 217 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 APBB3O95704 486 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PTTG1O95997 202 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 MYCLP1P12525 358 aaPredicted RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 CEACAM7Q14002 265 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GRHL2Q6ISB3 625 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 ALKAL1Q6UXT8 129 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SYVN1Q86TM6 617 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SERPINA11Q86U17 422 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 CIR1Q86X95 450 aaPredicted RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 CCSER2Q9H7U1 834 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 TCF7L1Q9HCS4 588 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 CDH10Q9Y6N8 788 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 TCRBV3S1A0A5B6 114 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PCCBP05166 539 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 LINGO3P0C6S8 592 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 HOXC13P31276 330 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PLPP4Q5VZY2 271 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 LRRC66Q68CR7 880 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 EIF5AL1Q6IS14 154 aaKnown RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 NUP54Q7Z3B4 507 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 FAM156AQ8NDB6 213 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 KLHDC9Q8NEP7 349 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SUN3Q8TAQ9 357 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GATA6Q92908 595 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 C12orf66Q96MD2 445 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SDHAF3Q9NRP4 125 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 TVP23BQ9NYZ1 205 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 LRRTM2O43300 516 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 HCN1O60741 890 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 PSIP1O75475 530 aaKnown RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 RNASEH2AO75792 299 aaKnown RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 MT-ND5P03915 603 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SLC2A2P11168 524 aaPredicted RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 CST5P28325 142 aaPredicted RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 ARHGDIBP52566 201 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GRSF1Q12849 480 aaKnown RBP eCLIP10.23□□□□□ -0.77
PGK1-201ENST00000373316 MAB21L1Q13394 359 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GGTA1PQ4G0N0 100 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 SPANXN4Q5MJ08 99 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 EOGTQ5NDL2 527 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 GPRIN1Q7Z2K8 1008 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 ATCAYQ86WG3 371 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 DRAXINQ8NBI3 349 aaPredicted RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 TRMT2BQ96GJ1 504 aaKnown RBP10.23□□□□□ -0.77
PGK1-201ENST00000373316 IGSF21Q96ID5 467 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 OR2AG1Q9H205 316 aa10.23□□□□□ -0.77
PGK1-201ENST00000373316 A0A0X1KG70 313 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CXorf51AA0A1B0GTR3 108 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 OR14I1A6ND48 311 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 GIMD1P0DJR0 217 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 KDELR2P33947 212 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 NUDT1P36639 197 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 DNASE1L1P49184 302 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 HSPB3Q12988 150 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 PYHIN1Q6K0P9 492 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 PRSS55Q6UWB4 352 aaPredicted RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 NRROSQ86YC3 692 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 OR6K2Q8NGY2 324 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 UBTD2Q8WUN7 234 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 METTL21AQ8WXB1 218 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 NTMT1Q9BV86 223 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 TDP1Q9NUW8 608 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 ADAMTS6Q9UKP5 1117 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 DGKBQ9Y6T7 804 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 SCN10AQ9Y5Y9 1956 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 TMEM150CB9EJG8 249 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 DCKP27707 260 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 SYT16Q17RD7 645 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CPZQ66K79 652 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 TMEM17Q86X19 198 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 OR52N2Q8NGI0 321 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 ZNF689Q96CS4 500 aaPredicted RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 TM9SF2Q99805 663 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 IFT27Q9BW83 186 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CPEB1Q9BZB8 566 aaKnown RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 KLHL21Q9UJP4 597 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 SCML1Q9UN30 329 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 MED31Q9Y3C7 131 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 PCDHGA7Q9Y5G6 932 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms