RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SPOCK3Q9BQ16 436 aa18.09■□□□□ 0.49
TRAPPC3-204ENST00000373166 DERL2Q9GZP9 239 aa18.09■□□□□ 0.49
TRAPPC3-204ENST00000373166 ZNF835Q9Y2P0 537 aa18.09■□□□□ 0.49
TRAPPC3-204ENST00000373166 OARD1Q9Y530 152 aa18.09■□□□□ 0.49
TRAPPC3-204ENST00000373166 PCDHGB6Q9Y5F9 930 aa18.09■□□□□ 0.49
TRAPPC3-204ENST00000373166 FAM227AF5H4B4 570 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 P2RX6O15547 441 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 PHGDHO43175 533 aaKnown RBP18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 WISP2O76076 250 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 C8orf89P0DMQ9 161 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 NPPBP16860 134 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 PHBP35232 272 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 KIR3DL1P43629 444 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 CCR8P51685 355 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 KRTAP10-9P60411 292 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 RAB10P61026 200 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 CSNK1G2P78368 415 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 Q6ZPB1 254 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 SPPL2CQ8IUH8 684 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 TBC1D19Q8N5T2 526 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 GPR137Q96N19 417 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 DRC3Q9H069 523 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 TSPYL1Q9H0U9 437 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 MEMO1Q9Y316 297 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 DYRK1BQ9Y463 629 aa18.08■□□□□ 0.48
TRAPPC3-204ENST00000373166 KCNE1BA0A087WTH5 132 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 WISP3O95389 354 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 CCDC166P0CW27 439 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 HNMTP50135 292 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 ATP6V0D1P61421 351 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 EFTUD2Q15029 972 aaKnown RBP eCLIP18.07■□□□□ 0.489e-8■■■■■ 28.3
TRAPPC3-204ENST00000373166 ZKSCAN8Q15776 578 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 CEP112Q8N8E3 955 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 SLC5A11Q8WWX8 675 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 IFT81Q8WYA0 676 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 ZNF354BQ96LW1 612 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 OR4K3Q96R72 315 aa18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 DMGDHQ9UI17 866 aaKnown RBP18.07■□□□□ 0.48
TRAPPC3-204ENST00000373166 A0A0A6YYC8 382 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 FEZF1A0PJY2 475 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 I3L1I5 382 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 FAM155BO75949 473 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 STATHP02808 62 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 BCL6P41182 706 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 ALDH6A1Q02252 535 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 TLE4Q04727 773 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 CSHL1Q14406 222 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 CDSNQ15517 529 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 ACER2Q5QJU3 275 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 RAPH1Q70E73 1250 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 VN1R4Q7Z5H5 301 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 ASPGQ86U10 573 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 THOC6Q86W42 341 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 ZC3H7AQ8IWR0 971 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 CAMKVQ8NCB2 501 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 ABHD11Q8NFV4 315 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 TSNARE1Q96NA8 513 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 FMO2Q99518 471 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 MCCC2Q9HCC0 563 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 NINJ2Q9NZG7 142 aa18.06■□□□□ 0.48
TRAPPC3-204ENST00000373166 FOXS1O43638 330 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 SEC24DO94855 1032 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 SLC35G6P0C7Q6 338 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 AVPR1BP47901 424 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 FAM53BQ14153 422 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 SYT16Q17RD7 645 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 BTBD16Q32M84 506 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 PLAG1Q6DJT9 500 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 RELL1Q8IUW5 271 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 BEST3Q8N1M1 668 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 TCAIMQ8N3R3 496 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 SPATA6LQ8N4H0 392 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 ARHGEF39Q8N4T4 335 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 AMER2Q8N7J2 671 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 MFSD9Q8NBP5 474 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 NEIL2Q969S2 332 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 CYTH2Q99418 400 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 KLHL1Q9NR64 748 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 C19orf25Q9UFG5 118 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 KCNE2Q9Y6J6 123 aa18.05■□□□□ 0.48
TRAPPC3-204ENST00000373166 MTORP42345 2549 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 TRBC2A0A5B9 178 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 NCF1BA6NI72 391 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 NCF1CA8MVU1 366 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 NPIPA5E9PKD4 350 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 S100BP04271 92 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 CYC1P08574 325 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 NCF1P14598 390 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 CD46P15529 392 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 CD1DP15813 335 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 CRABP2P29373 138 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 EEF1DP29692 281 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 MAT1AQ00266 395 aaKnown RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 MEF2AQ02078 507 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 TUBA3CQ13748 450 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 TGFBIQ15582 683 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 CATSPEREQ5SY80 951 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 H3F3CQ6NXT2 135 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 TUBA3EQ6PEY2 450 aa18.04■□□□□ 0.48
TRAPPC3-204ENST00000373166 CPEB2Q7Z5Q1 589 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms