RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TMPRSS11AQ6ZMR5 421 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ZNF852Q6ZMS4 543 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 TSPAN33Q86UF1 283 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 FAM9CQ8IZT9 166 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 DENND6BQ8NEG7 585 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 JPH3Q8WXH2 748 aaPredicted RBP13.17□□□□□ -0.3
USP49-201ENST00000373006 CRELD1Q96HD1 420 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
USP49-201ENST00000373006 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 RDH14Q9HBH5 336 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
USP49-201ENST00000373006 PADI2Q9Y2J8 665 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 GABRR3A8MPY1 467 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 ADAMDEC1O15204 470 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 IL7P13232 177 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 AKR1A1P14550 325 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 AOAHP28039 575 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 HNF1BP35680 557 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 FEN1P39748 380 aaKnown RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 MICAQ29983 383 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 HKDC1Q2TB90 917 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 PTCHD4Q6ZW05 846 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 VRK3Q8IV63 474 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 TRPV1Q8NER1 839 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 ANKK1Q8NFD2 765 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 COQ8BQ96D53 544 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 V9GYH0 126 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 TSPAN4O14817 238 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 ALX3O95076 343 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 VNN2O95498 520 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 HIST1H2AGP0C0S8 130 aaPredicted RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 HIST1H2ADP20671 130 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 CD72P21854 359 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 BOP1Q14137 746 aaKnown RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 CSGALNACT1Q8TDX6 532 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 DACT3Q96B18 629 aaPredicted RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 HIST1H2AHQ96KK5 128 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 HIST1H2AJQ99878 128 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 H2AFJQ9BTM1 129 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 A0A1B0GVM2 712 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 SMAD6O43541 496 aaKnown RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 ANXA8P13928 327 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 ZNF157P51786 506 aaPredicted RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 ALDH6A1Q02252 535 aaKnown RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 ABRQ12979 859 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 RFLNAQ6ZTI6 216 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 RTN4RL1Q86UN2 441 aaPredicted RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 SLC44A2Q8IWA5 706 aaPredicted RBP13.16□□□□□ -0.3
USP49-201ENST00000373006 CCDC28AQ8IWP9 274 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 GPR156Q8NFN8 814 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 OR4K1Q8NGD4 311 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 P2RY13Q9BPV8 354 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
USP49-201ENST00000373006 BNIP3LO60238 219 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 UGT2B17O75795 530 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 TPPPO94811 219 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 ASGR1P07306 291 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 CYP2A7P20853 494 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 SSTR4P31391 388 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 CNR2P34972 360 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 EIF4HQ15056 248 aaKnown RBP13.15□□□□□ -0.3
USP49-201ENST00000373006 TIMM50Q3ZCQ8 353 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 LEXMQ3ZCV2 418 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 GPR155Q7Z3F1 870 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 SLC34A3Q8N130 599 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 SNAPC3Q92966 411 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 OPALINQ96PE5 141 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 TMEM121BQ9BXQ6 578 aaPredicted RBP13.15□□□□□ -0.3
USP49-201ENST00000373006 VPS29Q9UBQ0 182 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 GRIP1Q9Y3R0 1128 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 PCDHGB2Q9Y5G2 931 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 COCHO43405 550 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
USP49-201ENST00000373006 GBAP04062 536 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 CD22P20273 847 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 IRF8Q02556 426 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 CPTPQ5TA50 214 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 FAM131AQ6UXB0 335 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 MACC1Q6ZN28 852 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 BCDIN3DQ7Z5W3 292 aaKnown RBP13.15□□□□□ -0.3
USP49-201ENST00000373006 NLRP8Q86W28 1048 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 NXPE1Q8N323 547 aa13.15□□□□□ -0.3
USP49-201ENST00000373006 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 478.4 ms