RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 TEX35Q5T0J7 233 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 RBMXL3Q8N7X1 1067 aaKnown RBP18.89■□□□□ 0.61
TMEM53-205ENST00000372244 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.89■□□□□ 0.61
TMEM53-205ENST00000372244 TBC1D20Q96BZ9 403 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 MTBPQ96DY7 904 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 PEX11GQ96HA9 241 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 IMMP1LQ96LU5 166 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 LHPPQ9H008 270 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 ZNF160Q9HCG1 818 aa18.89■□□□□ 0.61
TMEM53-205ENST00000372244 TNPO3Q9Y5L0 923 aaKnown RBP18.89■□□□□ 0.61
TMEM53-205ENST00000372244 RP1L1Q8IWN7 2480 aaPredicted RBP18.88■□□□□ 0.61
TMEM53-205ENST00000372244 MYO18BQ8IUG5 2567 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 NSG1A0A0A6YYJ2 146 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 GFAPP14136 432 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 RHAGQ02094 409 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 TLE1Q04724 770 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 PCOLCEQ15113 449 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 HIST2H2ACQ16777 129 aaPredicted RBP18.88■□□□□ 0.61
TMEM53-205ENST00000372244 TSNAXIP1Q2TAA8 658 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 MINDY4Q4G0A6 757 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 NADK2Q4G0N4 442 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 TOR1AIP1Q5JTV8 583 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 HIST2H2AA3Q6FI13 130 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 ADNP2Q6IQ32 1131 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 IGFL2Q6UWQ7 119 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 GSPT2Q8IYD1 628 aaKnown RBP18.88■□□□□ 0.61
TMEM53-205ENST00000372244 LAS2Q8IYD9 372 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 TEX9Q8N6V9 391 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 METTL21AQ8WXB1 218 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 GAL3ST3Q96A11 431 aa18.88■□□□□ 0.61
TMEM53-205ENST00000372244 ZBTB20Q9HC78 741 aaPredicted RBP18.88■□□□□ 0.61
TMEM53-205ENST00000372244 PRRC2CQ9Y520 2896 aaKnown RBP18.87■□□□□ 0.61
TMEM53-205ENST00000372244 LRRC14BA6NHZ5 514 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 FHP07954 510 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 PRR35P0CG20 571 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 OLR1P78380 273 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 COLEC12Q5KU26 742 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 AGAP7PQ5VUJ5 663 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 JMJD6Q6NYC1 403 aaPredicted RBP18.87■□□□□ 0.61
TMEM53-205ENST00000372244 KBTBD2Q8IY47 623 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 CNPY4Q8N129 248 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 PSMF1Q92530 271 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 UBE2E3Q969T4 207 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 THOC3Q96J01 351 aaKnown RBP18.87■□□□□ 0.61
TMEM53-205ENST00000372244 AGAP4Q96P64 663 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 QRFPRQ96P65 431 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 MRPL57Q9BQC6 102 aaKnown RBP18.87■□□□□ 0.61
TMEM53-205ENST00000372244 ANKZF1Q9H8Y5 726 aa18.87■□□□□ 0.61
TMEM53-205ENST00000372244 E2F3O00716 465 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 SERPINA7P05543 415 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 SBK3P0C264 359 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 ICAM2P13598 275 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 HPDP32754 393 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-205ENST00000372244 CD97P48960 835 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 BTN3A2P78410 334 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 EEF1A2Q05639 463 aaKnown RBP18.86■□□□□ 0.61
TMEM53-205ENST00000372244 LANCL3Q6ZV70 420 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 CPEB2Q7Z5Q1 589 aaKnown RBP18.86■□□□□ 0.61
TMEM53-205ENST00000372244 ANKRD37Q7Z713 158 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 OR2L5Q8NG80 312 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 OR7G3Q8NG95 312 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 ZNF473Q8WTR7 871 aaKnown RBP18.86■□□□□ 0.61
TMEM53-205ENST00000372244 TUBB6Q9BUF5 446 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 REXO4Q9GZR2 422 aaKnown RBP18.86■□□□□ 0.61
TMEM53-205ENST00000372244 RIC8BQ9NVN3 520 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 CPSF2Q9P2I0 782 aaKnown RBP18.86■□□□□ 0.61
TMEM53-205ENST00000372244 TMCO1Q9UM00 188 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 TSC22D4Q9Y3Q8 395 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 NUP210LQ5VU65 1888 aa18.86■□□□□ 0.61
TMEM53-205ENST00000372244 MAGEB17A8MXT2 336 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 ERI3O43414 337 aaKnown RBP18.85■□□□□ 0.61
TMEM53-205ENST00000372244 SIX3O95343 332 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-205ENST00000372244 RUNX2Q13950 521 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 ABRAXAS2Q15018 415 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 NSDHLQ15738 373 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 MFSD4BQ5TF39 518 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 LIPJQ5W064 366 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 GRHL2Q6ISB3 625 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 MED27Q6P2C8 311 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 ABHD17CQ6PCB6 329 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 RIPOR1Q6ZS17 1223 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 CA13Q8N1Q1 262 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 CCT6BQ92526 530 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 F2RL3Q96RI0 385 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 LMF1Q96S06 567 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 WDR77Q9BQA1 342 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-205ENST00000372244 CCDC77Q9BR77 488 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 NPLQ9BXD5 320 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-205ENST00000372244 XPR1Q9UBH6 696 aa18.85■□□□□ 0.61
TMEM53-205ENST00000372244 STX16-NPEPL1H3BU86 382 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 STX16O14662 325 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 UGDHO60701 494 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 CDC123O75794 336 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-205ENST00000372244 SORBS2O94875 1100 aaKnown RBP18.84■□□□□ 0.61
TMEM53-205ENST00000372244 RNH1P13489 461 aaKnown RBP18.84■□□□□ 0.61
TMEM53-205ENST00000372244 JAK1P23458 1154 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 GTF2H2Q13888 395 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 IRAK1BP1Q5VVH5 260 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 SLC6A19Q695T7 634 aa18.84■□□□□ 0.61
TMEM53-205ENST00000372244 GTF2H2CQ6P1K8 395 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms